RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 MT1LQ93083 61 aa8.45□□□□□ -1.06
SSX2IP-209ENST00000603677 MT1MQ8N339 61 aa8.38□□□□□ -1.07
SSX2IP-209ENST00000603677 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
SSX2IP-209ENST00000603677 PSPHP1O15172 72 aa8.32□□□□□ -1.08
SSX2IP-209ENST00000603677 KRTAP12-3P60328 96 aa8.29□□□□□ -1.08
SSX2IP-209ENST00000603677 LCE4AQ5TA78 99 aa8.16□□□□□ -1.1
SSX2IP-209ENST00000603677 GPR98Q8WXG9 6306 aa8.15□□□□□ -1.1
SSX2IP-209ENST00000603677 KRTAP23-1A1A580 65 aa8.15□□□□□ -1.1
SSX2IP-209ENST00000603677 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.1
SSX2IP-209ENST00000603677 KRTAP4-9Q9BYQ8 210 aa8.14□□□□□ -1.11
SSX2IP-209ENST00000603677 KRTAP19-4Q3LI73 84 aa8.12□□□□□ -1.11
SSX2IP-209ENST00000603677 A6NED7 52 aa8.11□□□□□ -1.11
SSX2IP-209ENST00000603677 KRTAP4-3Q9BYR4 195 aa8.04□□□□□ -1.12
SSX2IP-209ENST00000603677 LCE1DQ5T752 114 aa8□□□□□ -1.13
SSX2IP-209ENST00000603677 KRTAP5-4Q6L8H1 288 aa8□□□□□ -1.13
SSX2IP-209ENST00000603677 PCP4P48539 62 aa7.96□□□□□ -1.14
SSX2IP-209ENST00000603677 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
SSX2IP-209ENST00000603677 KRTAP4-7Q9BYR0 210 aa7.91□□□□□ -1.14
SSX2IP-209ENST00000603677 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
SSX2IP-209ENST00000603677 KRTAP4-6Q9BYQ5 205 aa7.9□□□□□ -1.14
SSX2IP-209ENST00000603677 MT4P47944 62 aa7.87□□□□□ -1.15
SSX2IP-209ENST00000603677 HMCN1Q96RW7 5635 aa7.81□□□□□ -1.16
SSX2IP-209ENST00000603677 ROMO1P60602 79 aa7.8□□□□□ -1.16
SSX2IP-209ENST00000603677 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
SSX2IP-209ENST00000603677 KRTAP5-5Q701N2 237 aaPredicted RBP7.71□□□□□ -1.18
SSX2IP-209ENST00000603677 LCE3CQ5T5A8 94 aa7.65□□□□□ -1.18
SSX2IP-209ENST00000603677 AHNAK2Q8IVF2 5795 aa7.63□□□□□ -1.19
SSX2IP-209ENST00000603677 SPRR5A0A1B0GTR4 108 aa7.58□□□□□ -1.2
SSX2IP-209ENST00000603677 KRTAP12-4P60329 112 aa7.55□□□□□ -1.2
SSX2IP-209ENST00000603677 KRTAP20-2Q3LI61 65 aa7.49□□□□□ -1.21
SSX2IP-209ENST00000603677 KRTAP5-10Q6L8G5 202 aa7.49□□□□□ -1.21
SSX2IP-209ENST00000603677 SYNE1Q8NF91 8797 aaKnown RBP7.28□□□□□ -1.24
SSX2IP-209ENST00000603677 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
SSX2IP-209ENST00000603677 MT1AP04731 61 aa7.23□□□□□ -1.25
SSX2IP-209ENST00000603677 KRTAP5-7Q6L8G8 165 aa7.23□□□□□ -1.25
SSX2IP-209ENST00000603677 KRTAP9-6A8MVA2 160 aa7.1□□□□□ -1.27
SSX2IP-209ENST00000603677 KRTAP6-1Q3LI64 71 aa7.1□□□□□ -1.27
SSX2IP-209ENST00000603677 KRTAP4-12Q9BQ66 201 aa7.04□□□□□ -1.28
SSX2IP-209ENST00000603677 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
SSX2IP-209ENST00000603677 KRTAP5-2Q701N4 177 aa7.02□□□□□ -1.29
SSX2IP-209ENST00000603677 KRTAP9-4Q9BYQ2 154 aa6.98□□□□□ -1.29
SSX2IP-209ENST00000603677 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
SSX2IP-209ENST00000603677 KRTAP9-9Q9BYP9 154 aa6.8□□□□□ -1.32
SSX2IP-209ENST00000603677 KRTAP6-2Q3LI66 62 aa6.77□□□□□ -1.33
SSX2IP-209ENST00000603677 H3BS24 57 aa6.67□□□□□ -1.34
SSX2IP-209ENST00000603677 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
SSX2IP-209ENST00000603677 MT3P25713 68 aa6.65□□□□□ -1.34
SSX2IP-209ENST00000603677 KRTAP5-8O75690 187 aa6.58□□□□□ -1.36
SSX2IP-209ENST00000603677 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
SSX2IP-209ENST00000603677 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
SSX2IP-209ENST00000603677 AHNAKQ09666 5890 aaKnown RBP6.32□□□□□ -1.4
SSX2IP-209ENST00000603677 MUC5ACP98088 5654 aa6.28□□□□□ -1.4
SSX2IP-209ENST00000603677 KRTAP5-1Q6L8H4 278 aa6.25□□□□□ -1.41
SSX2IP-209ENST00000603677 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
SSX2IP-209ENST00000603677 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
SSX2IP-209ENST00000603677 LCE1EQ5T753 118 aa6.15□□□□□ -1.42
SSX2IP-209ENST00000603677 KRTAP4-2Q9BYR5 136 aa6.15□□□□□ -1.42
SSX2IP-209ENST00000603677 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
SSX2IP-209ENST00000603677 LCE1CQ5T751 118 aa5.68□□□□□ -1.5
SSX2IP-209ENST00000603677 LCE1BQ5T7P3 118 aa5.68□□□□□ -1.5
SSX2IP-209ENST00000603677 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
SSX2IP-209ENST00000603677 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
SSX2IP-209ENST00000603677 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
SSX2IP-209ENST00000603677 LCE3EQ5T5B0 92 aa5.25□□□□□ -1.57
SSX2IP-209ENST00000603677 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.58
SSX2IP-209ENST00000603677 KRTAP5-11Q6L8G4 156 aa5.12□□□□□ -1.59
SSX2IP-209ENST00000603677 LCE1FQ5T754 118 aa5.03□□□□□ -1.6
SSX2IP-209ENST00000603677 KRTAP21-2Q3LI59 83 aa4.71□□□□□ -1.66
SSX2IP-209ENST00000603677 PHGR1C9JFL3 82 aa4.39□□□□□ -1.71
SSX2IP-209ENST00000603677 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
SSX2IP-209ENST00000603677 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
SSX2IP-209ENST00000603677 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
SSX2IP-209ENST00000603677 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
SSX2IP-209ENST00000603677 PRM1P04553 51 aa3.92□□□□□ -1.78
SSX2IP-209ENST00000603677 INE1O15225 51 aa3.62□□□□□ -1.83
SSX2IP-209ENST00000603677 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
SSX2IP-209ENST00000603677 MUC16Q8WXI7 14507 aa2.88□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 120.3 ms