RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 LCE2AQ5TA79 106 aaPredicted RBP1.02□□□□□ -2.25
NEB-218ENST00000603639 MDN1Q9NU22 5596 aa1.02□□□□□ -2.25
NEB-218ENST00000603639 NEBP20929 6669 aa1.02□□□□□ -2.25
NEB-218ENST00000603639 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
NEB-218ENST00000603639 KRTAP19-6Q3LI70 58 aa1.01□□□□□ -2.25
NEB-218ENST00000603639 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
NEB-218ENST00000603639 LCE3BQ5TA77 95 aa1.01□□□□□ -2.25
NEB-218ENST00000603639 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
NEB-218ENST00000603639 SPRR2DP22532 72 aa0.99□□□□□ -2.25
NEB-218ENST00000603639 KRTAP2-2Q9BYT5 123 aa0.99□□□□□ -2.25
NEB-218ENST00000603639 PCLOQ9Y6V0 5065 aa0.98□□□□□ -2.25
NEB-218ENST00000603639 PRM1P04553 51 aa0.98□□□□□ -2.25
NEB-218ENST00000603639 KRTAP19-2Q3LHN2 52 aa0.97□□□□□ -2.25
NEB-218ENST00000603639 LPAP08519 4548 aa0.97□□□□□ -2.25
NEB-218ENST00000603639 SPRR2EP22531 72 aa0.96□□□□□ -2.26
NEB-218ENST00000603639 EPPK1P58107 5090 aaKnown RBP0.96□□□□□ -2.26
NEB-218ENST00000603639 ABCA13Q86UQ4 5058 aa0.95□□□□□ -2.26
NEB-218ENST00000603639 UBR4Q5T4S7 5183 aa0.95□□□□□ -2.26
NEB-218ENST00000603639 KRTAP6-3Q3LI67 103 aa0.94□□□□□ -2.26
NEB-218ENST00000603639 KMT2DO14686 5537 aa0.94□□□□□ -2.26
NEB-218ENST00000603639 LCE4AQ5TA78 99 aa0.94□□□□□ -2.26
NEB-218ENST00000603639 HYDINQ4G0P3 5121 aa0.93□□□□□ -2.26
NEB-218ENST00000603639 KIAA1109Q2LD37 5005 aa0.92□□□□□ -2.26
NEB-218ENST00000603639 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
NEB-218ENST00000603639 LCE1EQ5T753 118 aa0.91□□□□□ -2.26
NEB-218ENST00000603639 MUC2Q02817 5179 aa0.9□□□□□ -2.27
NEB-218ENST00000603639 HMCN2Q8NDA2 5059 aa0.9□□□□□ -2.27
NEB-218ENST00000603639 KRTAP9-6A8MVA2 160 aa0.9□□□□□ -2.27
NEB-218ENST00000603639 KRTAP9-7A8MTY7 169 aa0.89□□□□□ -2.27
NEB-218ENST00000603639 LCE1BQ5T7P3 118 aa0.89□□□□□ -2.27
NEB-218ENST00000603639 KRTAP9-6A0A140TA67 174 aa0.89□□□□□ -2.27
NEB-218ENST00000603639 FCGBPQ9Y6R7 5405 aaPredicted RBP0.88□□□□□ -2.27
NEB-218ENST00000603639 FAT4Q6V0I7 4981 aa0.88□□□□□ -2.27
NEB-218ENST00000603639 KRTAP9-2Q9BYQ4 174 aa0.87□□□□□ -2.27
NEB-218ENST00000603639 USH2AO75445 5202 aa0.86□□□□□ -2.27
NEB-218ENST00000603639 KRTAP19-7Q3SYF9 63 aa0.86□□□□□ -2.27
NEB-218ENST00000603639 LCE5AQ5TCM9 118 aa0.85□□□□□ -2.27
NEB-218ENST00000603639 KRTAP6-2Q3LI66 62 aa0.84□□□□□ -2.27
NEB-218ENST00000603639 OBSCNQ5VST9 7968 aa0.84□□□□□ -2.28
NEB-218ENST00000603639 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
NEB-218ENST00000603639 KRTAP20-1Q3LI63 56 aa0.83□□□□□ -2.28
NEB-218ENST00000603639 KRTAP4-11Q9BYQ6 195 aa0.83□□□□□ -2.28
NEB-218ENST00000603639 KRTAP5-9P26371 169 aa0.82□□□□□ -2.28
NEB-218ENST00000603639 LCE1DQ5T752 114 aa0.82□□□□□ -2.28
NEB-218ENST00000603639 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
NEB-218ENST00000603639 MT4P47944 62 aa0.8□□□□□ -2.28
NEB-218ENST00000603639 LCE1FQ5T754 118 aa0.8□□□□□ -2.28
NEB-218ENST00000603639 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.78□□□□□ -2.28
NEB-218ENST00000603639 HMCN1Q96RW7 5635 aa0.78□□□□□ -2.28
NEB-218ENST00000603639 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
NEB-218ENST00000603639 KRTAP4-4Q9BYR3 166 aa0.76□□□□□ -2.29
NEB-218ENST00000603639 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
NEB-218ENST00000603639 LCE1CQ5T751 118 aa0.73□□□□□ -2.29
NEB-218ENST00000603639 KRTAP5-5Q701N2 237 aaPredicted RBP0.73□□□□□ -2.29
NEB-218ENST00000603639 KRTAP9-9Q9BYP9 154 aa0.73□□□□□ -2.29
NEB-218ENST00000603639 SSPOA2VEC9 5147 aa0.72□□□□□ -2.29
NEB-218ENST00000603639 KRTAP4-12Q9BQ66 201 aa0.72□□□□□ -2.29
NEB-218ENST00000603639 KRTAP4-2Q9BYR5 136 aa0.72□□□□□ -2.29
NEB-218ENST00000603639 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
NEB-218ENST00000603639 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
NEB-218ENST00000603639 SYNE1Q8NF91 8797 aaKnown RBP0.71□□□□□ -2.3
NEB-218ENST00000603639 KRTAP4-6Q9BYQ5 205 aa0.7□□□□□ -2.3
NEB-218ENST00000603639 KRTAP5-4Q6L8H1 288 aa0.7□□□□□ -2.3
NEB-218ENST00000603639 MUC5ACP98088 5654 aa0.68□□□□□ -2.3
NEB-218ENST00000603639 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.66□□□□□ -2.3
NEB-218ENST00000603639 KRTAP5-3Q6L8H2 238 aa0.65□□□□□ -2.31
NEB-218ENST00000603639 KRTAP5-11Q6L8G4 156 aa0.62□□□□□ -2.31
NEB-218ENST00000603639 KRTAP5-8O75690 187 aa0.62□□□□□ -2.31
NEB-218ENST00000603639 KRTAP5-2Q701N4 177 aa0.62□□□□□ -2.31
NEB-218ENST00000603639 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
NEB-218ENST00000603639 KRTAP5-7Q6L8G8 165 aa0.6□□□□□ -2.31
NEB-218ENST00000603639 KRTAP5-1Q6L8H4 278 aa0.59□□□□□ -2.31
NEB-218ENST00000603639 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
NEB-218ENST00000603639 MUC19Q7Z5P9 8384 aa0.55□□□□□ -2.32
NEB-218ENST00000603639 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
NEB-218ENST00000603639 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
NEB-218ENST00000603639 KRTAP21-2Q3LI59 83 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms