RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 FLGP20930 4061 aaPredicted RBP0.66□□□□□ -2.3
SGMS1-207ENST00000602619 HYDINQ4G0P3 5121 aa0.64□□□□□ -2.31
SGMS1-207ENST00000602619 RYR2Q92736 4967 aa0.64□□□□□ -2.31
SGMS1-207ENST00000602619 M0QZ58 72 aa0.64□□□□□ -2.31
SGMS1-207ENST00000602619 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
SGMS1-207ENST00000602619 HERC1Q15751 4861 aa0.64□□□□□ -2.31
SGMS1-207ENST00000602619 MUC17Q685J3 4493 aa0.63□□□□□ -2.31
SGMS1-207ENST00000602619 RYR1P21817 5038 aa0.63□□□□□ -2.31
SGMS1-207ENST00000602619 S4R3F8 94 aa0.63□□□□□ -2.31
SGMS1-207ENST00000602619 RYR3Q15413 4870 aa0.62□□□□□ -2.31
SGMS1-207ENST00000602619 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
SGMS1-207ENST00000602619 KMT2CQ8NEZ4 4911 aaKnown RBP0.62□□□□□ -2.31
SGMS1-207ENST00000602619 DMBT1Q9UGM3 2413 aaPredicted RBP0.62□□□□□ -2.31
SGMS1-207ENST00000602619 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
SGMS1-207ENST00000602619 LPAP08519 4548 aa0.6□□□□□ -2.31
SGMS1-207ENST00000602619 LRP2P98164 4655 aa0.6□□□□□ -2.31
SGMS1-207ENST00000602619 HERC2O95714 4834 aa0.59□□□□□ -2.31
SGMS1-207ENST00000602619 BIRC6Q9NR09 4857 aa0.59□□□□□ -2.31
SGMS1-207ENST00000602619 SMR3BP02814 79 aaPredicted RBP0.59□□□□□ -2.31
SGMS1-207ENST00000602619 MT1HL1P0DM35 61 aa0.57□□□□□ -2.32
SGMS1-207ENST00000602619 TNP1P09430 55 aa0.56□□□□□ -2.32
SGMS1-207ENST00000602619 KIAA1109Q2LD37 5005 aa0.55□□□□□ -2.32
SGMS1-207ENST00000602619 HMCN2Q8NDA2 5059 aa0.55□□□□□ -2.32
SGMS1-207ENST00000602619 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
SGMS1-207ENST00000602619 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
SGMS1-207ENST00000602619 KRTAP2-1Q9BYU5 128 aa0.55□□□□□ -2.32
SGMS1-207ENST00000602619 PCLOQ9Y6V0 5065 aa0.55□□□□□ -2.32
SGMS1-207ENST00000602619 KRTAP19-2Q3LHN2 52 aa0.54□□□□□ -2.32
SGMS1-207ENST00000602619 EPPK1P58107 5090 aaKnown RBP0.54□□□□□ -2.32
SGMS1-207ENST00000602619 ABCA13Q86UQ4 5058 aa0.54□□□□□ -2.32
SGMS1-207ENST00000602619 SPRR2GQ9BYE4 73 aa0.53□□□□□ -2.32
SGMS1-207ENST00000602619 KRTAP8-1Q8IUC2 63 aa0.52□□□□□ -2.33
SGMS1-207ENST00000602619 MUC2Q02817 5179 aa0.51□□□□□ -2.33
SGMS1-207ENST00000602619 M0R2T5 61 aa0.51□□□□□ -2.33
SGMS1-207ENST00000602619 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
SGMS1-207ENST00000602619 UBR4Q5T4S7 5183 aa0.5□□□□□ -2.33
SGMS1-207ENST00000602619 FAT4Q6V0I7 4981 aa0.5□□□□□ -2.33
SGMS1-207ENST00000602619 RNF213Q63HN8 5207 aa0.5□□□□□ -2.33
SGMS1-207ENST00000602619 KRTAP19-8Q3LI54 63 aa0.5□□□□□ -2.33
SGMS1-207ENST00000602619 MT1XP80297 61 aa0.48□□□□□ -2.33
SGMS1-207ENST00000602619 MT2AP02795 61 aa0.47□□□□□ -2.33
SGMS1-207ENST00000602619 MT1BP07438 61 aa0.47□□□□□ -2.33
SGMS1-207ENST00000602619 MT1FP04733 61 aa0.46□□□□□ -2.34
SGMS1-207ENST00000602619 MT1HP80294 61 aa0.46□□□□□ -2.34
SGMS1-207ENST00000602619 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
SGMS1-207ENST00000602619 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
SGMS1-207ENST00000602619 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
SGMS1-207ENST00000602619 MT1EP04732 61 aa0.43□□□□□ -2.34
SGMS1-207ENST00000602619 USH2AO75445 5202 aa0.43□□□□□ -2.34
SGMS1-207ENST00000602619 SSPOA2VEC9 5147 aa0.42□□□□□ -2.34
SGMS1-207ENST00000602619 PRM1P04553 51 aa0.42□□□□□ -2.34
SGMS1-207ENST00000602619 KRTAP19-7Q3SYF9 63 aa0.42□□□□□ -2.34
SGMS1-207ENST00000602619 MT1LQ93083 61 aa0.42□□□□□ -2.34
SGMS1-207ENST00000602619 MUC12Q9UKN1 5478 aa0.41□□□□□ -2.34
SGMS1-207ENST00000602619 KMT2DO14686 5537 aa0.41□□□□□ -2.34
SGMS1-207ENST00000602619 MT1AP04731 61 aa0.4□□□□□ -2.35
SGMS1-207ENST00000602619 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
SGMS1-207ENST00000602619 MT1GP13640 62 aa0.39□□□□□ -2.35
SGMS1-207ENST00000602619 KRTAP19-6Q3LI70 58 aa0.39□□□□□ -2.35
SGMS1-207ENST00000602619 SPRR2DP22532 72 aa0.38□□□□□ -2.35
SGMS1-207ENST00000602619 MT1MQ8N339 61 aa0.38□□□□□ -2.35
SGMS1-207ENST00000602619 SPRR2FQ96RM1 72 aa0.35□□□□□ -2.35
SGMS1-207ENST00000602619 SPRR2AP35326 72 aa0.34□□□□□ -2.36
SGMS1-207ENST00000602619 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
SGMS1-207ENST00000602619 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
SGMS1-207ENST00000602619 SPRR2BP35325 72 aa0.33□□□□□ -2.36
SGMS1-207ENST00000602619 SPRR2EP22531 72 aa0.32□□□□□ -2.36
SGMS1-207ENST00000602619 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
SGMS1-207ENST00000602619 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
SGMS1-207ENST00000602619 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
SGMS1-207ENST00000602619 DSTQ03001 7570 aaKnown RBP0.28□□□□□ -2.36
SGMS1-207ENST00000602619 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
SGMS1-207ENST00000602619 KRTAP20-2Q3LI61 65 aa0.26□□□□□ -2.37
SGMS1-207ENST00000602619 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
SGMS1-207ENST00000602619 KRTAP20-1Q3LI63 56 aa0.25□□□□□ -2.37
SGMS1-207ENST00000602619 NEBP20929 6669 aa0.22□□□□□ -2.37
SGMS1-207ENST00000602619 MT4P47944 62 aa0.22□□□□□ -2.37
SGMS1-207ENST00000602619 GPR98Q8WXG9 6306 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 120.1 ms