RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 MT1LQ93083 61 aa7.06□□□□□ -1.28
SIN3B-212ENST00000602204 SYNE2Q8WXH0 6885 aaKnown RBP7.03□□□□□ -1.28
SIN3B-212ENST00000602204 LCE3BQ5TA77 95 aa7□□□□□ -1.29
SIN3B-212ENST00000602204 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
SIN3B-212ENST00000602204 KRTAP19-3Q7Z4W3 81 aa6.99□□□□□ -1.29
SIN3B-212ENST00000602204 MT1GP13640 62 aa6.94□□□□□ -1.3
SIN3B-212ENST00000602204 LCE1AQ5T7P2 110 aa6.91□□□□□ -1.3
SIN3B-212ENST00000602204 KRTAP4-12Q9BQ66 201 aa6.9□□□□□ -1.3
SIN3B-212ENST00000602204 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
SIN3B-212ENST00000602204 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
SIN3B-212ENST00000602204 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
SIN3B-212ENST00000602204 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
SIN3B-212ENST00000602204 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
SIN3B-212ENST00000602204 SPRR2EP22531 72 aa6.86□□□□□ -1.31
SIN3B-212ENST00000602204 SPRR2BP35325 72 aa6.86□□□□□ -1.31
SIN3B-212ENST00000602204 SPRR2AP35326 72 aa6.86□□□□□ -1.31
SIN3B-212ENST00000602204 MT1MQ8N339 61 aa6.82□□□□□ -1.32
SIN3B-212ENST00000602204 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
SIN3B-212ENST00000602204 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
SIN3B-212ENST00000602204 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
SIN3B-212ENST00000602204 SPRR2DP22532 72 aa6.63□□□□□ -1.35
SIN3B-212ENST00000602204 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
SIN3B-212ENST00000602204 NEBP20929 6669 aa6.57□□□□□ -1.36
SIN3B-212ENST00000602204 LCE1DQ5T752 114 aa6.55□□□□□ -1.36
SIN3B-212ENST00000602204 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
SIN3B-212ENST00000602204 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
SIN3B-212ENST00000602204 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
SIN3B-212ENST00000602204 KRTAP4-2Q9BYR5 136 aa6.35□□□□□ -1.39
SIN3B-212ENST00000602204 KRTAP2-3P0C7H8 128 aa6.31□□□□□ -1.4
SIN3B-212ENST00000602204 KRTAP2-4Q9BYR9 128 aa6.31□□□□□ -1.4
SIN3B-212ENST00000602204 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
SIN3B-212ENST00000602204 KRTAP20-1Q3LI63 56 aa6.22□□□□□ -1.41
SIN3B-212ENST00000602204 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
SIN3B-212ENST00000602204 KRTAP2-2Q9BYT5 123 aa6.16□□□□□ -1.42
SIN3B-212ENST00000602204 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
SIN3B-212ENST00000602204 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
SIN3B-212ENST00000602204 NDUFAF8A1L188 74 aa6.05□□□□□ -1.44
SIN3B-212ENST00000602204 MT1AP04731 61 aa6.03□□□□□ -1.44
SIN3B-212ENST00000602204 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
SIN3B-212ENST00000602204 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
SIN3B-212ENST00000602204 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
SIN3B-212ENST00000602204 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
SIN3B-212ENST00000602204 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
SIN3B-212ENST00000602204 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
SIN3B-212ENST00000602204 MT4P47944 62 aa5.69□□□□□ -1.5
SIN3B-212ENST00000602204 KRTAP20-2Q3LI61 65 aa5.59□□□□□ -1.51
SIN3B-212ENST00000602204 MT3P25713 68 aa5.47□□□□□ -1.53
SIN3B-212ENST00000602204 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
SIN3B-212ENST00000602204 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.53
SIN3B-212ENST00000602204 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
SIN3B-212ENST00000602204 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
SIN3B-212ENST00000602204 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
SIN3B-212ENST00000602204 INE1O15225 51 aa5.1□□□□□ -1.59
SIN3B-212ENST00000602204 H3BS24 57 aa5.07□□□□□ -1.6
SIN3B-212ENST00000602204 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
SIN3B-212ENST00000602204 GPR98Q8WXG9 6306 aa4.97□□□□□ -1.61
SIN3B-212ENST00000602204 AHNAK2Q8IVF2 5795 aa4.96□□□□□ -1.61
SIN3B-212ENST00000602204 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
SIN3B-212ENST00000602204 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
SIN3B-212ENST00000602204 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
SIN3B-212ENST00000602204 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
SIN3B-212ENST00000602204 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
SIN3B-212ENST00000602204 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
SIN3B-212ENST00000602204 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
SIN3B-212ENST00000602204 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
SIN3B-212ENST00000602204 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
SIN3B-212ENST00000602204 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
SIN3B-212ENST00000602204 PRM1P04553 51 aa4.22□□□□□ -1.73
SIN3B-212ENST00000602204 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
SIN3B-212ENST00000602204 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
SIN3B-212ENST00000602204 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
SIN3B-212ENST00000602204 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
SIN3B-212ENST00000602204 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SIN3B-212ENST00000602204 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
SIN3B-212ENST00000602204 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
SIN3B-212ENST00000602204 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
SIN3B-212ENST00000602204 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
SIN3B-212ENST00000602204 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 38.6 ms