RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 COX7CP15954 63 aa7.97□□□□□ -1.13
GTPBP3-227ENST00000602056 TNP1P09430 55 aa7.93□□□□□ -1.14
GTPBP3-227ENST00000602056 A0A1B0GU69 56 aa7.91□□□□□ -1.14
GTPBP3-227ENST00000602056 KRTAP4-7Q9BYR0 210 aa7.89□□□□□ -1.15
GTPBP3-227ENST00000602056 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
GTPBP3-227ENST00000602056 KRTAP5-3Q6L8H2 238 aa7.73□□□□□ -1.17
GTPBP3-227ENST00000602056 KRTAP5-7Q6L8G8 165 aa7.71□□□□□ -1.18
GTPBP3-227ENST00000602056 KRTAP20-2Q3LI61 65 aa7.68□□□□□ -1.18
GTPBP3-227ENST00000602056 KRTAP5-5Q701N2 237 aaPredicted RBP7.67□□□□□ -1.18
GTPBP3-227ENST00000602056 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
GTPBP3-227ENST00000602056 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
GTPBP3-227ENST00000602056 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
GTPBP3-227ENST00000602056 KRTAP12-4P60329 112 aa7.47□□□□□ -1.21
GTPBP3-227ENST00000602056 SYNE1Q8NF91 8797 aaKnown RBP7.46□□□□□ -1.22
GTPBP3-227ENST00000602056 LINC01558Q9Y6Z2 57 aa7.46□□□□□ -1.22
GTPBP3-227ENST00000602056 ANAPC13Q9BS18 74 aa7.45□□□□□ -1.22
GTPBP3-227ENST00000602056 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
GTPBP3-227ENST00000602056 ATP5EP56381 51 aaPredicted RBP7.32□□□□□ -1.24
GTPBP3-227ENST00000602056 KRTAP25-1Q3LHN0 102 aa7.32□□□□□ -1.24
GTPBP3-227ENST00000602056 UQCR11O14957 56 aa7.3□□□□□ -1.24
GTPBP3-227ENST00000602056 KRTAP19-4Q3LI73 84 aa7.21□□□□□ -1.26
GTPBP3-227ENST00000602056 MIR22HGQ0VDD5 57 aa7.12□□□□□ -1.27
GTPBP3-227ENST00000602056 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
GTPBP3-227ENST00000602056 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
GTPBP3-227ENST00000602056 KRTAP4-11Q9BYQ6 195 aa7.09□□□□□ -1.27
GTPBP3-227ENST00000602056 KRTAP5-2Q701N4 177 aa7.06□□□□□ -1.28
GTPBP3-227ENST00000602056 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
GTPBP3-227ENST00000602056 TMEM258P61165 79 aa7.02□□□□□ -1.29
GTPBP3-227ENST00000602056 MT1AP04731 61 aa7.01□□□□□ -1.29
GTPBP3-227ENST00000602056 KRTAP6-1Q3LI64 71 aa7.01□□□□□ -1.29
GTPBP3-227ENST00000602056 K7ERS5 55 aa6.98□□□□□ -1.29
GTPBP3-227ENST00000602056 KRTAP5-8O75690 187 aa6.87□□□□□ -1.31
GTPBP3-227ENST00000602056 PSPHP1O15172 72 aa6.81□□□□□ -1.32
GTPBP3-227ENST00000602056 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
GTPBP3-227ENST00000602056 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
GTPBP3-227ENST00000602056 KRTAP6-2Q3LI66 62 aa6.76□□□□□ -1.33
GTPBP3-227ENST00000602056 AHNAKQ09666 5890 aaKnown RBP6.73□□□□□ -1.33
GTPBP3-227ENST00000602056 MUC5ACP98088 5654 aa6.7□□□□□ -1.34
GTPBP3-227ENST00000602056 MUC5BQ9HC84 5762 aaPredicted RBP6.7□□□□□ -1.34
GTPBP3-227ENST00000602056 Q1T7F1 81 aa6.68□□□□□ -1.34
GTPBP3-227ENST00000602056 V9GYY9 64 aa6.68□□□□□ -1.34
GTPBP3-227ENST00000602056 OBSCNQ5VST9 7968 aa6.66□□□□□ -1.34
GTPBP3-227ENST00000602056 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
GTPBP3-227ENST00000602056 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
GTPBP3-227ENST00000602056 A6NED7 52 aa6.51□□□□□ -1.37
GTPBP3-227ENST00000602056 ROMO1P60602 79 aa6.51□□□□□ -1.37
GTPBP3-227ENST00000602056 KRTAP9-9Q9BYP9 154 aa6.51□□□□□ -1.37
GTPBP3-227ENST00000602056 KRTAP5-1Q6L8H4 278 aa6.41□□□□□ -1.38
GTPBP3-227ENST00000602056 MT3P25713 68 aa6.4□□□□□ -1.38
GTPBP3-227ENST00000602056 PCP4P48539 62 aa6.01□□□□□ -1.45
GTPBP3-227ENST00000602056 LCE1EQ5T753 118 aa5.96□□□□□ -1.46
GTPBP3-227ENST00000602056 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
GTPBP3-227ENST00000602056 LCE1BQ5T7P3 118 aa5.65□□□□□ -1.5
GTPBP3-227ENST00000602056 LCE1CQ5T751 118 aa5.54□□□□□ -1.52
GTPBP3-227ENST00000602056 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
GTPBP3-227ENST00000602056 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
GTPBP3-227ENST00000602056 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
GTPBP3-227ENST00000602056 LCE3DQ9BYE3 92 aa5.03□□□□□ -1.6
GTPBP3-227ENST00000602056 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
GTPBP3-227ENST00000602056 LCE1FQ5T754 118 aa4.96□□□□□ -1.62
GTPBP3-227ENST00000602056 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
GTPBP3-227ENST00000602056 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
GTPBP3-227ENST00000602056 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
GTPBP3-227ENST00000602056 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
GTPBP3-227ENST00000602056 PHGR1C9JFL3 82 aa4.64□□□□□ -1.67
GTPBP3-227ENST00000602056 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
GTPBP3-227ENST00000602056 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
GTPBP3-227ENST00000602056 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
GTPBP3-227ENST00000602056 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
GTPBP3-227ENST00000602056 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
GTPBP3-227ENST00000602056 LUZP6Q538Z0 58 aa4□□□□□ -1.77
GTPBP3-227ENST00000602056 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
GTPBP3-227ENST00000602056 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
GTPBP3-227ENST00000602056 PRM1P04553 51 aa3.33□□□□□ -1.88
GTPBP3-227ENST00000602056 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
GTPBP3-227ENST00000602056 H3BS24 57 aa3.02□□□□□ -1.93
GTPBP3-227ENST00000602056 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.95
GTPBP3-227ENST00000602056 INE1O15225 51 aa2.89□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 188.8 ms