RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	KRTAP5-8	O75690	187 aa		3.89	□□□□□ -1.79
NUP62-223	ENST00000601665	LOC100996750	A0A140TA64	210 aa		3.87	□□□□□ -1.79
NUP62-223	ENST00000601665		A0A1B0GU33	70 aa		3.86	□□□□□ -1.79
NUP62-223	ENST00000601665	LOC105371267	A0A1B0GV96	52 aa		3.85	□□□□□ -1.79
NUP62-223	ENST00000601665		H3BS24	57 aa		3.85	□□□□□ -1.79
NUP62-223	ENST00000601665	KRTAP9-9	Q9BYP9	154 aa		3.82	□□□□□ -1.8
NUP62-223	ENST00000601665	KRTAP5-2	Q701N4	177 aa		3.79	□□□□□ -1.8
NUP62-223	ENST00000601665	SMIM20	Q8N5G0	67 aa		3.79	□□□□□ -1.8
NUP62-223	ENST00000601665	SPANXA2-OT1	Q8N9U9	137 aa		3.79	□□□□□ -1.8
NUP62-223	ENST00000601665	SNURF	Q9Y675	71 aa		3.79	□□□□□ -1.8
NUP62-223	ENST00000601665	SMIM26	A0A096LP01	95 aa		3.78	□□□□□ -1.8
NUP62-223	ENST00000601665	OBSCN	Q5VST9	7968 aa		3.75	□□□□□ -1.81
NUP62-223	ENST00000601665	COA5	Q86WW8	74 aa		3.74	□□□□□ -1.81
NUP62-223	ENST00000601665	PCP4L1	A6NKN8	68 aa		3.73	□□□□□ -1.81
NUP62-223	ENST00000601665		A8MU10	97 aa		3.71	□□□□□ -1.82
NUP62-223	ENST00000601665		J3QR89	54 aa		3.69	□□□□□ -1.82
NUP62-223	ENST00000601665	SERP2	Q8N6R1	65 aa		3.66	□□□□□ -1.82
NUP62-223	ENST00000601665	MT1A	P04731	61 aa		3.65	□□□□□ -1.83
NUP62-223	ENST00000601665	KRTAP6-1	Q3LI64	71 aa		3.65	□□□□□ -1.83
NUP62-223	ENST00000601665	KRTAP19-4	Q3LI73	84 aa		3.62	□□□□□ -1.83
NUP62-223	ENST00000601665	KRTAP6-2	Q3LI66	62 aa		3.61	□□□□□ -1.83
NUP62-223	ENST00000601665		A0A1B0GU69	56 aa		3.6	□□□□□ -1.83
NUP62-223	ENST00000601665	KRTAP25-1	Q3LHN0	102 aa		3.57	□□□□□ -1.84
NUP62-223	ENST00000601665	KRTAP9-4	Q9BYQ2	154 aa		3.57	□□□□□ -1.84
NUP62-223	ENST00000601665	LCE3C	Q5T5A8	94 aa		3.53	□□□□□ -1.84
NUP62-223	ENST00000601665	KRTAP5-1	Q6L8H4	278 aa		3.49	□□□□□ -1.85
NUP62-223	ENST00000601665		A0A1B0GV90	55 aa		3.48	□□□□□ -1.85
NUP62-223	ENST00000601665	KRTAP15-1	Q3LI76	137 aa		3.47	□□□□□ -1.85
NUP62-223	ENST00000601665	PRR15L	Q9BU68	103 aa		3.4	□□□□□ -1.87
NUP62-223	ENST00000601665	MT3	P25713	68 aa		3.39	□□□□□ -1.87
NUP62-223	ENST00000601665		H7BZZ5	65 aa		3.33	□□□□□ -1.88
NUP62-223	ENST00000601665	KRTAP9-6	A8MVA2	160 aa		3.29	□□□□□ -1.88
NUP62-223	ENST00000601665		K7ERU9	68 aa		3.29	□□□□□ -1.88
NUP62-223	ENST00000601665	KRTAP23-1	A1A580	65 aa		3.26	□□□□□ -1.89
NUP62-223	ENST00000601665	UQCR11	O14957	56 aa		3.21	□□□□□ -1.9
NUP62-223	ENST00000601665	COX7C	P15954	63 aa		3.21	□□□□□ -1.9
NUP62-223	ENST00000601665		K7ERS5	55 aa		3.2	□□□□□ -1.9
NUP62-223	ENST00000601665	LCE1E	Q5T753	118 aa		3.2	□□□□□ -1.9
NUP62-223	ENST00000601665	KRTAP4-12	Q9BQ66	201 aa		3.2	□□□□□ -1.9
NUP62-223	ENST00000601665	SVIP	Q8NHG7	77 aa		3.14	□□□□□ -1.91
NUP62-223	ENST00000601665	LINC01558	Q9Y6Z2	57 aa		3.13	□□□□□ -1.91
NUP62-223	ENST00000601665	LCE1B	Q5T7P3	118 aa		3.11	□□□□□ -1.91
NUP62-223	ENST00000601665	RPS28	P62857	69 aa	Known RBP	3.09	□□□□□ -1.91
NUP62-223	ENST00000601665	MIR22HG	Q0VDD5	57 aa		3.09	□□□□□ -1.91
NUP62-223	ENST00000601665	KRTAP4-2	Q9BYR5	136 aa		3.04	□□□□□ -1.92
NUP62-223	ENST00000601665	LCE1C	Q5T751	118 aa		2.96	□□□□□ -1.94
NUP62-223	ENST00000601665	ATP5E	P56381	51 aa	Predicted RBP	2.95	□□□□□ -1.94
NUP62-223	ENST00000601665	PCP4	P48539	62 aa		2.94	□□□□□ -1.94
NUP62-223	ENST00000601665	CDC42SE1	Q9NRR8	79 aa		2.92	□□□□□ -1.94
NUP62-223	ENST00000601665	ANAPC13	Q9BS18	74 aa		2.86	□□□□□ -1.95
NUP62-223	ENST00000601665	ROMO1	P60602	79 aa		2.82	□□□□□ -1.96
NUP62-223	ENST00000601665		Q1T7F1	81 aa		2.82	□□□□□ -1.96
NUP62-223	ENST00000601665	PHGR1	C9JFL3	82 aa		2.79	□□□□□ -1.96
NUP62-223	ENST00000601665	CCDC179	H3BU77	68 aa		2.79	□□□□□ -1.96
NUP62-223	ENST00000601665	KRTAP5-11	Q6L8G4	156 aa		2.79	□□□□□ -1.96
NUP62-223	ENST00000601665	LCE1F	Q5T754	118 aa		2.77	□□□□□ -1.97
NUP62-223	ENST00000601665	PSPHP1	O15172	72 aa		2.76	□□□□□ -1.97
NUP62-223	ENST00000601665		A0A0A0MQY5	61 aa		2.71	□□□□□ -1.98
NUP62-223	ENST00000601665	TMEM258	P61165	79 aa		2.67	□□□□□ -1.98
NUP62-223	ENST00000601665		V9GYY9	64 aa		2.67	□□□□□ -1.98
NUP62-223	ENST00000601665		A6NED7	52 aa		2.66	□□□□□ -1.98
NUP62-223	ENST00000601665	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.61	□□□□□ -1.99
NUP62-223	ENST00000601665	LCE3D	Q9BYE3	92 aa		2.46	□□□□□ -2.02
NUP62-223	ENST00000601665	KRTAP21-2	Q3LI59	83 aa		2.39	□□□□□ -2.03
NUP62-223	ENST00000601665	MUC19	Q7Z5P9	8384 aa		2.37	□□□□□ -2.03
NUP62-223	ENST00000601665	KRTAP4-4	Q9BYR3	166 aa		2.31	□□□□□ -2.04
NUP62-223	ENST00000601665	NDUFAF8	A1L188	74 aa		2.26	□□□□□ -2.05
NUP62-223	ENST00000601665	PRAC1	Q96KF2	57 aa		2.26	□□□□□ -2.05
NUP62-223	ENST00000601665	LCE3E	Q5T5B0	92 aa		2.23	□□□□□ -2.05
NUP62-223	ENST00000601665	KRTAP21-1	Q3LI58	79 aa		2.13	□□□□□ -2.07
NUP62-223	ENST00000601665	BRK1	Q8WUW1	75 aa		1.79	□□□□□ -2.12
NUP62-223	ENST00000601665	MUC16	Q8WXI7	14507 aa		1.65	□□□□□ -2.14
NUP62-223	ENST00000601665	PMAIP1	Q13794	54 aa		1.54	□□□□□ -2.16
NUP62-223	ENST00000601665	LUZP6	Q538Z0	58 aa		1.53	□□□□□ -2.16
NUP62-223	ENST00000601665	PRM1	P04553	51 aa		1.41	□□□□□ -2.18
NUP62-223	ENST00000601665	PRO0628	Q9UI54	55 aa		1.39	□□□□□ -2.19
NUP62-223	ENST00000601665	KTN1-AS1	Q86SY8	53 aa		1.25	□□□□□ -2.21
NUP62-223	ENST00000601665	INE1	O15225	51 aa		0.86	□□□□□ -2.27

Retrieved 78 of 20,778 RNA–protein pairs in 99.3 ms