RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 SERP2Q8N6R1 65 aa2.61□□□□□ -1.99
LINC00343-209ENST00000601607 C1orf64Q8NEQ6 169 aa2.6□□□□□ -1.99
LINC00343-209ENST00000601607 TRAV22A0A0B4J277 110 aa2.59□□□□□ -1.99
LINC00343-209ENST00000601607 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
LINC00343-209ENST00000601607 COX7CP15954 63 aa2.58□□□□□ -2
LINC00343-209ENST00000601607 PMAIP1Q13794 54 aa2.58□□□□□ -2
LINC00343-209ENST00000601607 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
LINC00343-209ENST00000601607 LOC101927531A0A1B0GV80 90 aa2.57□□□□□ -2
LINC00343-209ENST00000601607 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
LINC00343-209ENST00000601607 CYP4F30PQ9H0H9 118 aa2.56□□□□□ -2
LINC00343-209ENST00000601607 KRTAP12-4P60329 112 aa2.55□□□□□ -2
LINC00343-209ENST00000601607 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
LINC00343-209ENST00000601607 MUC5ACP98088 5654 aa2.55□□□□□ -2
LINC00343-209ENST00000601607 H0Y9P7 68 aa2.54□□□□□ -2
LINC00343-209ENST00000601607 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
LINC00343-209ENST00000601607 H0YAA0 97 aa2.53□□□□□ -2
LINC00343-209ENST00000601607 NDUFC1O43677 76 aa2.53□□□□□ -2
LINC00343-209ENST00000601607 MT1EP04732 61 aa2.53□□□□□ -2
LINC00343-209ENST00000601607 MP68P56378 58 aa2.53□□□□□ -2
LINC00343-209ENST00000601607 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
LINC00343-209ENST00000601607 ANAPC13Q9BS18 74 aa2.53□□□□□ -2
LINC00343-209ENST00000601607 SMIM26A0A096LP01 95 aa2.52□□□□□ -2.01
LINC00343-209ENST00000601607 H7BZZ5 65 aa2.52□□□□□ -2.01
LINC00343-209ENST00000601607 RPS28P62857 69 aaKnown RBP2.52□□□□□ -2.01
LINC00343-209ENST00000601607 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
LINC00343-209ENST00000601607 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
LINC00343-209ENST00000601607 C20orf197Q8N268 126 aa2.5□□□□□ -2.01
LINC00343-209ENST00000601607 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
LINC00343-209ENST00000601607 PSPHP1O15172 72 aa2.49□□□□□ -2.01
LINC00343-209ENST00000601607 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
LINC00343-209ENST00000601607 R4GN34 69 aa2.48□□□□□ -2.01
LINC00343-209ENST00000601607 ATP5EP56381 51 aaPredicted RBP2.47□□□□□ -2.01
LINC00343-209ENST00000601607 TMEM258P61165 79 aa2.46□□□□□ -2.02
LINC00343-209ENST00000601607 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
LINC00343-209ENST00000601607 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
LINC00343-209ENST00000601607 SNURFQ9Y675 71 aa2.46□□□□□ -2.02
LINC00343-209ENST00000601607 M0QZ58 72 aa2.45□□□□□ -2.02
LINC00343-209ENST00000601607 MT1GP13640 62 aa2.45□□□□□ -2.02
LINC00343-209ENST00000601607 P0C880 135 aa2.43□□□□□ -2.02
LINC00343-209ENST00000601607 MT1MQ8N339 61 aa2.43□□□□□ -2.02
LINC00343-209ENST00000601607 ACYP2P14621 99 aa2.41□□□□□ -2.02
LINC00343-209ENST00000601607 SPINT4Q6UDR6 99 aa2.41□□□□□ -2.02
LINC00343-209ENST00000601607 SERP1Q9Y6X1 66 aa2.38□□□□□ -2.03
LINC00343-209ENST00000601607 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
LINC00343-209ENST00000601607 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
LINC00343-209ENST00000601607 COA5Q86WW8 74 aa2.36□□□□□ -2.03
LINC00343-209ENST00000601607 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
LINC00343-209ENST00000601607 MT1LQ93083 61 aa2.34□□□□□ -2.03
LINC00343-209ENST00000601607 SPTSSBQ8NFR3 76 aa2.33□□□□□ -2.04
LINC00343-209ENST00000601607 BRK1Q8WUW1 75 aa2.33□□□□□ -2.04
LINC00343-209ENST00000601607 Q1T7F1 81 aa2.31□□□□□ -2.04
LINC00343-209ENST00000601607 LINC01558Q9Y6Z2 57 aa2.31□□□□□ -2.04
LINC00343-209ENST00000601607 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
LINC00343-209ENST00000601607 CHKB-CPT1BH3BT56 60 aa2.27□□□□□ -2.05
LINC00343-209ENST00000601607 K7ERS5 55 aa2.25□□□□□ -2.05
LINC00343-209ENST00000601607 A0A0D9SG42 100 aa2.24□□□□□ -2.05
LINC00343-209ENST00000601607 A6NED7 52 aa2.24□□□□□ -2.05
LINC00343-209ENST00000601607 A0A1B0GU69 56 aa2.2□□□□□ -2.06
LINC00343-209ENST00000601607 PRR15LQ9BU68 103 aa2.2□□□□□ -2.06
LINC00343-209ENST00000601607 A0A1B0GU33 70 aa2.19□□□□□ -2.06
LINC00343-209ENST00000601607 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
LINC00343-209ENST00000601607 SPATA8Q6RVD6 105 aa2.18□□□□□ -2.06
LINC00343-209ENST00000601607 UQCR11O14957 56 aa2.17□□□□□ -2.06
LINC00343-209ENST00000601607 C10orf95Q9H7T3 257 aa2.14□□□□□ -2.07
LINC00343-209ENST00000601607 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
LINC00343-209ENST00000601607 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
LINC00343-209ENST00000601607 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
LINC00343-209ENST00000601607 ROMO1P60602 79 aa2.09□□□□□ -2.07
LINC00343-209ENST00000601607 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.08
LINC00343-209ENST00000601607 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
LINC00343-209ENST00000601607 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
LINC00343-209ENST00000601607 MT1AP04731 61 aa1.97□□□□□ -2.09
LINC00343-209ENST00000601607 TNP1P09430 55 aa1.92□□□□□ -2.1
LINC00343-209ENST00000601607 INE1O15225 51 aa1.7□□□□□ -2.14
LINC00343-209ENST00000601607 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
LINC00343-209ENST00000601607 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
LINC00343-209ENST00000601607 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
LINC00343-209ENST00000601607 PRM1P04553 51 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 77.6 ms