RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
ARHGEF1-220ENST00000600274 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
ARHGEF1-220ENST00000600274 MT1EP04732 61 aa4.01□□□□□ -1.77
ARHGEF1-220ENST00000600274 MT1LQ93083 61 aa4□□□□□ -1.77
ARHGEF1-220ENST00000600274 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
ARHGEF1-220ENST00000600274 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
ARHGEF1-220ENST00000600274 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
ARHGEF1-220ENST00000600274 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
ARHGEF1-220ENST00000600274 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
ARHGEF1-220ENST00000600274 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
ARHGEF1-220ENST00000600274 MT1GP13640 62 aa3.89□□□□□ -1.79
ARHGEF1-220ENST00000600274 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
ARHGEF1-220ENST00000600274 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
ARHGEF1-220ENST00000600274 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
ARHGEF1-220ENST00000600274 MT1MQ8N339 61 aa3.77□□□□□ -1.81
ARHGEF1-220ENST00000600274 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
ARHGEF1-220ENST00000600274 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
ARHGEF1-220ENST00000600274 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
ARHGEF1-220ENST00000600274 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
ARHGEF1-220ENST00000600274 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
ARHGEF1-220ENST00000600274 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
ARHGEF1-220ENST00000600274 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
ARHGEF1-220ENST00000600274 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
ARHGEF1-220ENST00000600274 SPRR2EP22531 72 aa3.55□□□□□ -1.84
ARHGEF1-220ENST00000600274 SPRR2BP35325 72 aa3.55□□□□□ -1.84
ARHGEF1-220ENST00000600274 SPRR2AP35326 72 aa3.55□□□□□ -1.84
ARHGEF1-220ENST00000600274 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
ARHGEF1-220ENST00000600274 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
ARHGEF1-220ENST00000600274 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
ARHGEF1-220ENST00000600274 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
ARHGEF1-220ENST00000600274 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
ARHGEF1-220ENST00000600274 SPRR2DP22532 72 aa3.39□□□□□ -1.87
ARHGEF1-220ENST00000600274 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
ARHGEF1-220ENST00000600274 MT1AP04731 61 aa3.32□□□□□ -1.88
ARHGEF1-220ENST00000600274 PRM1P04553 51 aa3.29□□□□□ -1.88
ARHGEF1-220ENST00000600274 NEBP20929 6669 aa3.28□□□□□ -1.88
ARHGEF1-220ENST00000600274 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
ARHGEF1-220ENST00000600274 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
ARHGEF1-220ENST00000600274 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
ARHGEF1-220ENST00000600274 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
ARHGEF1-220ENST00000600274 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.9
ARHGEF1-220ENST00000600274 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
ARHGEF1-220ENST00000600274 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
ARHGEF1-220ENST00000600274 MT4P47944 62 aa3.11□□□□□ -1.91
ARHGEF1-220ENST00000600274 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
ARHGEF1-220ENST00000600274 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
ARHGEF1-220ENST00000600274 MT3P25713 68 aa3.04□□□□□ -1.92
ARHGEF1-220ENST00000600274 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
ARHGEF1-220ENST00000600274 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
ARHGEF1-220ENST00000600274 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
ARHGEF1-220ENST00000600274 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
ARHGEF1-220ENST00000600274 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
ARHGEF1-220ENST00000600274 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
ARHGEF1-220ENST00000600274 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
ARHGEF1-220ENST00000600274 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
ARHGEF1-220ENST00000600274 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
ARHGEF1-220ENST00000600274 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
ARHGEF1-220ENST00000600274 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
ARHGEF1-220ENST00000600274 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
ARHGEF1-220ENST00000600274 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
ARHGEF1-220ENST00000600274 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
ARHGEF1-220ENST00000600274 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
ARHGEF1-220ENST00000600274 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
ARHGEF1-220ENST00000600274 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
ARHGEF1-220ENST00000600274 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
ARHGEF1-220ENST00000600274 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
ARHGEF1-220ENST00000600274 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
ARHGEF1-220ENST00000600274 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
ARHGEF1-220ENST00000600274 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
ARHGEF1-220ENST00000600274 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
ARHGEF1-220ENST00000600274 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
ARHGEF1-220ENST00000600274 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
ARHGEF1-220ENST00000600274 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
ARHGEF1-220ENST00000600274 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
ARHGEF1-220ENST00000600274 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
ARHGEF1-220ENST00000600274 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
ARHGEF1-220ENST00000600274 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
ARHGEF1-220ENST00000600274 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 88.2 ms