RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 A6NN06 94 aa4.49□□□□□ -1.69
SMG9-207ENST00000598860 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
SMG9-207ENST00000598860 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
SMG9-207ENST00000598860 MT1BP07438 61 aa4.47□□□□□ -1.69
SMG9-207ENST00000598860 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
SMG9-207ENST00000598860 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
SMG9-207ENST00000598860 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
SMG9-207ENST00000598860 A0A0D9SG42 100 aa4.42□□□□□ -1.7
SMG9-207ENST00000598860 A6NED7 52 aa4.42□□□□□ -1.7
SMG9-207ENST00000598860 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
SMG9-207ENST00000598860 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
SMG9-207ENST00000598860 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
SMG9-207ENST00000598860 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
SMG9-207ENST00000598860 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
SMG9-207ENST00000598860 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
SMG9-207ENST00000598860 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
SMG9-207ENST00000598860 K7ERS5 55 aa4.33□□□□□ -1.72
SMG9-207ENST00000598860 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
SMG9-207ENST00000598860 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
SMG9-207ENST00000598860 MT1XP80297 61 aa4.27□□□□□ -1.73
SMG9-207ENST00000598860 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
SMG9-207ENST00000598860 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
SMG9-207ENST00000598860 NEBP20929 6669 aa4.13□□□□□ -1.75
SMG9-207ENST00000598860 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
SMG9-207ENST00000598860 C10orf95Q9H7T3 257 aa4.12□□□□□ -1.75
SMG9-207ENST00000598860 TNP1P09430 55 aa4.1□□□□□ -1.75
SMG9-207ENST00000598860 ROMO1P60602 79 aa4.06□□□□□ -1.76
SMG9-207ENST00000598860 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
SMG9-207ENST00000598860 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
SMG9-207ENST00000598860 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
SMG9-207ENST00000598860 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
SMG9-207ENST00000598860 KMT2DO14686 5537 aa4.01□□□□□ -1.77
SMG9-207ENST00000598860 SPRR2EP22531 72 aa3.99□□□□□ -1.77
SMG9-207ENST00000598860 SPRR2BP35325 72 aa3.99□□□□□ -1.77
SMG9-207ENST00000598860 SPRR2AP35326 72 aa3.99□□□□□ -1.77
SMG9-207ENST00000598860 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
SMG9-207ENST00000598860 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
SMG9-207ENST00000598860 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
SMG9-207ENST00000598860 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
SMG9-207ENST00000598860 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
SMG9-207ENST00000598860 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
SMG9-207ENST00000598860 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
SMG9-207ENST00000598860 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
SMG9-207ENST00000598860 SPRR2DP22532 72 aa3.85□□□□□ -1.79
SMG9-207ENST00000598860 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
SMG9-207ENST00000598860 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
SMG9-207ENST00000598860 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
SMG9-207ENST00000598860 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
SMG9-207ENST00000598860 MT1EP04732 61 aa3.77□□□□□ -1.81
SMG9-207ENST00000598860 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
SMG9-207ENST00000598860 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
SMG9-207ENST00000598860 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
SMG9-207ENST00000598860 MT1LQ93083 61 aa3.66□□□□□ -1.82
SMG9-207ENST00000598860 MT1GP13640 62 aa3.65□□□□□ -1.83
SMG9-207ENST00000598860 MT1MQ8N339 61 aa3.57□□□□□ -1.84
SMG9-207ENST00000598860 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
SMG9-207ENST00000598860 MT4P47944 62 aa3.37□□□□□ -1.87
SMG9-207ENST00000598860 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
SMG9-207ENST00000598860 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
SMG9-207ENST00000598860 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
SMG9-207ENST00000598860 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
SMG9-207ENST00000598860 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.9
SMG9-207ENST00000598860 MT1AP04731 61 aa3.15□□□□□ -1.91
SMG9-207ENST00000598860 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
SMG9-207ENST00000598860 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
SMG9-207ENST00000598860 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
SMG9-207ENST00000598860 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
SMG9-207ENST00000598860 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
SMG9-207ENST00000598860 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
SMG9-207ENST00000598860 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
SMG9-207ENST00000598860 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
SMG9-207ENST00000598860 MUC5ACP98088 5654 aa2.57□□□□□ -2
SMG9-207ENST00000598860 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
SMG9-207ENST00000598860 INE1O15225 51 aa2.41□□□□□ -2.02
SMG9-207ENST00000598860 PRM1P04553 51 aa2.07□□□□□ -2.08
SMG9-207ENST00000598860 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
SMG9-207ENST00000598860 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
SMG9-207ENST00000598860 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms