RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
HERC3-213ENST00000598772 SPATA8Q6RVD6 105 aa0.96□□□□□ -2.26
HERC3-213ENST00000598772 S100A2P29034 98 aa0.95□□□□□ -2.26
HERC3-213ENST00000598772 SPATA45Q537H7 98 aa0.95□□□□□ -2.26
HERC3-213ENST00000598772 DMAC1Q96GE9 116 aa0.95□□□□□ -2.26
HERC3-213ENST00000598772 CHKB-CPT1BH3BT56 60 aa0.94□□□□□ -2.26
HERC3-213ENST00000598772 HSD52Q0P140 79 aa0.93□□□□□ -2.26
HERC3-213ENST00000598772 SCGB1A1P11684 91 aa0.92□□□□□ -2.26
HERC3-213ENST00000598772 ACYP2P14621 99 aa0.91□□□□□ -2.26
HERC3-213ENST00000598772 MP68P56378 58 aa0.9□□□□□ -2.27
HERC3-213ENST00000598772 TAX1BP3O14907 124 aa0.87□□□□□ -2.27
HERC3-213ENST00000598772 S100A6P06703 90 aa0.85□□□□□ -2.27
HERC3-213ENST00000598772 HIST1H4AP62805 103 aaKnown RBP0.85□□□□□ -2.27
HERC3-213ENST00000598772 SERP1Q9Y6X1 66 aa0.85□□□□□ -2.27
HERC3-213ENST00000598772 A0A1B0GU33 70 aa0.84□□□□□ -2.27
HERC3-213ENST00000598772 A8MU10 97 aa0.84□□□□□ -2.27
HERC3-213ENST00000598772 H3BT86 120 aa0.84□□□□□ -2.27
HERC3-213ENST00000598772 S100A1P23297 94 aa0.84□□□□□ -2.27
HERC3-213ENST00000598772 SEC61GP60059 68 aa0.84□□□□□ -2.27
HERC3-213ENST00000598772 SMIM26A0A096LP01 95 aa0.81□□□□□ -2.28
HERC3-213ENST00000598772 PRO0461Q9UI25 63 aa0.8□□□□□ -2.28
HERC3-213ENST00000598772 SERP2Q8N6R1 65 aa0.76□□□□□ -2.29
HERC3-213ENST00000598772 UQCR10Q9UDW1 63 aa0.76□□□□□ -2.29
HERC3-213ENST00000598772 H3BPC8 53 aa0.75□□□□□ -2.29
HERC3-213ENST00000598772 SPANXA2-OT1Q8N9U9 137 aa0.75□□□□□ -2.29
HERC3-213ENST00000598772 OCR1Q9BZK8 76 aa0.74□□□□□ -2.29
HERC3-213ENST00000598772 H7BZZ5 65 aa0.73□□□□□ -2.29
HERC3-213ENST00000598772 M0R143 59 aa0.71□□□□□ -2.3
HERC3-213ENST00000598772 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
HERC3-213ENST00000598772 LCE3DQ9BYE3 92 aa0.67□□□□□ -2.3
HERC3-213ENST00000598772 ATP5EP2Q5VTU8 51 aa0.65□□□□□ -2.31
HERC3-213ENST00000598772 RPS28P62857 69 aaKnown RBP0.63□□□□□ -2.31
HERC3-213ENST00000598772 PYY3Q5JQD4 70 aa0.63□□□□□ -2.31
HERC3-213ENST00000598772 A0A1B0GU69 56 aa0.62□□□□□ -2.31
HERC3-213ENST00000598772 COA5Q86WW8 74 aa0.62□□□□□ -2.31
HERC3-213ENST00000598772 PRR15LQ9BU68 103 aa0.6□□□□□ -2.31
HERC3-213ENST00000598772 ETDBQ3ZM63 59 aa0.59□□□□□ -2.31
HERC3-213ENST00000598772 SNURFQ9Y675 71 aa0.58□□□□□ -2.32
HERC3-213ENST00000598772 LINC00643Q86TS7 51 aa0.55□□□□□ -2.32
HERC3-213ENST00000598772 K7ERS5 55 aa0.5□□□□□ -2.33
HERC3-213ENST00000598772 F8W1H4 67 aa0.49□□□□□ -2.33
HERC3-213ENST00000598772 FAM240AA0A1B0GVK7 77 aa0.48□□□□□ -2.33
HERC3-213ENST00000598772 NDUFAF8A1L188 74 aa0.48□□□□□ -2.33
HERC3-213ENST00000598772 GTF2H5Q6ZYL4 71 aa0.46□□□□□ -2.34
HERC3-213ENST00000598772 SMIM20Q8N5G0 67 aa0.42□□□□□ -2.34
HERC3-213ENST00000598772 UQCR11O14957 56 aa0.41□□□□□ -2.34
HERC3-213ENST00000598772 MIR22HGQ0VDD5 57 aa0.39□□□□□ -2.35
HERC3-213ENST00000598772 COL5A1-AS1Q5SY13 56 aa0.39□□□□□ -2.35
HERC3-213ENST00000598772 CDC42SE1Q9NRR8 79 aa0.37□□□□□ -2.35
HERC3-213ENST00000598772 TMA7Q9Y2S6 64 aaKnown RBP0.37□□□□□ -2.35
HERC3-213ENST00000598772 ROMO1P60602 79 aa0.33□□□□□ -2.36
HERC3-213ENST00000598772 Q1T7F1 81 aa0.29□□□□□ -2.36
HERC3-213ENST00000598772 LINC01558Q9Y6Z2 57 aa0.29□□□□□ -2.36
HERC3-213ENST00000598772 SMIM6P0DI80 62 aa0.27□□□□□ -2.37
HERC3-213ENST00000598772 J3QR89 54 aa0.21□□□□□ -2.38
HERC3-213ENST00000598772 PRM1P04553 51 aa0.16□□□□□ -2.38
HERC3-213ENST00000598772 PSPHP1O15172 72 aa0.15□□□□□ -2.39
HERC3-213ENST00000598772 COX7CP15954 63 aa0.12□□□□□ -2.39
HERC3-213ENST00000598772 A6NED7 52 aa0.11□□□□□ -2.39
HERC3-213ENST00000598772 PCP4L1A6NKN8 68 aa0.1□□□□□ -2.39
HERC3-213ENST00000598772 A0A1B0GV90 55 aa0.06□□□□□ -2.4
HERC3-213ENST00000598772 A0A0A0MQY5 61 aa0.03□□□□□ -2.4
HERC3-213ENST00000598772 ATP5EP56381 51 aaPredicted RBP0.01□□□□□ -2.41
HERC3-213ENST00000598772 TMEM258P61165 79 aa0□□□□□ -2.41
HERC3-213ENST00000598772 LOC105371267A0A1B0GV96 52 aa-0.02□□□□□ -2.41
HERC3-213ENST00000598772 PRAC1Q96KF2 57 aa-0.02□□□□□ -2.41
HERC3-213ENST00000598772 V9GYY9 64 aa-0.03□□□□□ -2.41
HERC3-213ENST00000598772 K7ERU9 68 aa-0.04□□□□□ -2.42
HERC3-213ENST00000598772 PCP4P48539 62 aa-0.07□□□□□ -2.42
HERC3-213ENST00000598772 CCDC179H3BU77 68 aa-0.08□□□□□ -2.42
HERC3-213ENST00000598772 ANAPC13Q9BS18 74 aa-0.09□□□□□ -2.42
HERC3-213ENST00000598772 LUZP6Q538Z0 58 aa-0.16□□□□□ -2.44
HERC3-213ENST00000598772 BRK1Q8WUW1 75 aa-0.24□□□□□ -2.45
HERC3-213ENST00000598772 PMAIP1Q13794 54 aa-0.47□□□□□ -2.48
HERC3-213ENST00000598772 SVIPQ8NHG7 77 aa-0.55□□□□□ -2.5
HERC3-213ENST00000598772 INE1O15225 51 aa-0.73□□□□□ -2.53
HERC3-213ENST00000598772 KTN1-AS1Q86SY8 53 aa-0.8□□□□□ -2.54
HERC3-213ENST00000598772 PRO0628Q9UI54 55 aa-0.98□□□□□ -2.57
Retrieved 78 of 20,778 RNA–protein pairs in 65 ms