RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 LCE4AQ5TA78 99 aa8.03□□□□□ -1.12
SSBP4-205ENST00000598159 GPR98Q8WXG9 6306 aa8.03□□□□□ -1.12
SSBP4-205ENST00000598159 LCE1DQ5T752 114 aa8.01□□□□□ -1.13
SSBP4-205ENST00000598159 UQCR11O14957 56 aa8□□□□□ -1.13
SSBP4-205ENST00000598159 KRTAP4-3Q9BYR4 195 aa7.94□□□□□ -1.14
SSBP4-205ENST00000598159 MT4P47944 62 aa7.91□□□□□ -1.14
SSBP4-205ENST00000598159 KRTAP12-3P60328 96 aa7.87□□□□□ -1.15
SSBP4-205ENST00000598159 V9GYY9 64 aa7.86□□□□□ -1.15
SSBP4-205ENST00000598159 HMCN1Q96RW7 5635 aa7.85□□□□□ -1.15
SSBP4-205ENST00000598159 KRTAP5-4Q6L8H1 288 aa7.85□□□□□ -1.15
SSBP4-205ENST00000598159 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
SSBP4-205ENST00000598159 Q1T7F1 81 aa7.77□□□□□ -1.17
SSBP4-205ENST00000598159 KRTAP4-7Q9BYR0 210 aa7.75□□□□□ -1.17
SSBP4-205ENST00000598159 PSPHP1O15172 72 aa7.74□□□□□ -1.17
SSBP4-205ENST00000598159 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
SSBP4-205ENST00000598159 KRTAP25-1Q3LHN0 102 aa7.72□□□□□ -1.17
SSBP4-205ENST00000598159 K7ERS5 55 aa7.7□□□□□ -1.18
SSBP4-205ENST00000598159 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
SSBP4-205ENST00000598159 AHNAK2Q8IVF2 5795 aa7.58□□□□□ -1.2
SSBP4-205ENST00000598159 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
SSBP4-205ENST00000598159 A6NED7 52 aa7.52□□□□□ -1.21
SSBP4-205ENST00000598159 KRTAP5-5Q701N2 237 aaPredicted RBP7.49□□□□□ -1.21
SSBP4-205ENST00000598159 KRTAP5-10Q6L8G5 202 aa7.48□□□□□ -1.21
SSBP4-205ENST00000598159 KRTAP23-1A1A580 65 aa7.47□□□□□ -1.21
SSBP4-205ENST00000598159 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
SSBP4-205ENST00000598159 KRTAP20-2Q3LI61 65 aa7.4□□□□□ -1.22
SSBP4-205ENST00000598159 SPRR5A0A1B0GTR4 108 aa7.39□□□□□ -1.23
SSBP4-205ENST00000598159 KRTAP12-4P60329 112 aa7.37□□□□□ -1.23
SSBP4-205ENST00000598159 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
SSBP4-205ENST00000598159 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
SSBP4-205ENST00000598159 KRTAP5-3Q6L8H2 238 aa7.31□□□□□ -1.24
SSBP4-205ENST00000598159 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
SSBP4-205ENST00000598159 LCE3CQ5T5A8 94 aa7.25□□□□□ -1.25
SSBP4-205ENST00000598159 KRTAP5-7Q6L8G8 165 aa7.22□□□□□ -1.25
SSBP4-205ENST00000598159 ROMO1P60602 79 aa7.15□□□□□ -1.26
SSBP4-205ENST00000598159 SYNE1Q8NF91 8797 aaKnown RBP7.13□□□□□ -1.27
SSBP4-205ENST00000598159 PRO0628Q9UI54 55 aa7.08□□□□□ -1.28
SSBP4-205ENST00000598159 BRK1Q8WUW1 75 aa6.98□□□□□ -1.29
SSBP4-205ENST00000598159 MT1AP04731 61 aa6.97□□□□□ -1.29
SSBP4-205ENST00000598159 KRTAP6-1Q3LI64 71 aa6.91□□□□□ -1.3
SSBP4-205ENST00000598159 KRTAP5-2Q701N4 177 aa6.85□□□□□ -1.31
SSBP4-205ENST00000598159 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
SSBP4-205ENST00000598159 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
SSBP4-205ENST00000598159 KRTAP9-4Q9BYQ2 154 aa6.78□□□□□ -1.32
SSBP4-205ENST00000598159 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
SSBP4-205ENST00000598159 KRTAP6-2Q3LI66 62 aa6.62□□□□□ -1.35
SSBP4-205ENST00000598159 KRTAP5-8O75690 187 aa6.55□□□□□ -1.36
SSBP4-205ENST00000598159 KTN1-AS1Q86SY8 53 aa6.5□□□□□ -1.37
SSBP4-205ENST00000598159 OBSCNQ5VST9 7968 aa6.43□□□□□ -1.38
SSBP4-205ENST00000598159 MT3P25713 68 aa6.41□□□□□ -1.38
SSBP4-205ENST00000598159 MUC5ACP98088 5654 aa6.27□□□□□ -1.41
SSBP4-205ENST00000598159 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
SSBP4-205ENST00000598159 MUC5BQ9HC84 5762 aaPredicted RBP6.24□□□□□ -1.41
SSBP4-205ENST00000598159 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
SSBP4-205ENST00000598159 KRTAP5-1Q6L8H4 278 aa6.16□□□□□ -1.42
SSBP4-205ENST00000598159 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
SSBP4-205ENST00000598159 LCE1EQ5T753 118 aa5.91□□□□□ -1.46
SSBP4-205ENST00000598159 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
SSBP4-205ENST00000598159 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
SSBP4-205ENST00000598159 LCE1CQ5T751 118 aa5.48□□□□□ -1.53
SSBP4-205ENST00000598159 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
SSBP4-205ENST00000598159 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
SSBP4-205ENST00000598159 H3BS24 57 aa5.13□□□□□ -1.59
SSBP4-205ENST00000598159 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
SSBP4-205ENST00000598159 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
SSBP4-205ENST00000598159 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
SSBP4-205ENST00000598159 KRTAP5-11Q6L8G4 156 aa4.95□□□□□ -1.62
SSBP4-205ENST00000598159 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
SSBP4-205ENST00000598159 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
SSBP4-205ENST00000598159 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
SSBP4-205ENST00000598159 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
SSBP4-205ENST00000598159 PHGR1C9JFL3 82 aa4.36□□□□□ -1.71
SSBP4-205ENST00000598159 INE1O15225 51 aa4.35□□□□□ -1.71
SSBP4-205ENST00000598159 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
SSBP4-205ENST00000598159 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
SSBP4-205ENST00000598159 PRM1P04553 51 aa3.64□□□□□ -1.83
SSBP4-205ENST00000598159 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
SSBP4-205ENST00000598159 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 37.8 ms