RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 MT1LQ93083 61 aa8.14□□□□□ -1.11
IRF3-220ENST00000598108 PP632Q6XCG6 107 aa8.05□□□□□ -1.12
IRF3-220ENST00000598108 MT1MQ8N339 61 aa8.05□□□□□ -1.12
IRF3-220ENST00000598108 K7ERS5 55 aa8.01□□□□□ -1.13
IRF3-220ENST00000598108 PCP4P48539 62 aa7.99□□□□□ -1.13
IRF3-220ENST00000598108 KRTAP12-3P60328 96 aa7.96□□□□□ -1.14
IRF3-220ENST00000598108 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.14
IRF3-220ENST00000598108 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
IRF3-220ENST00000598108 A6NED7 52 aa7.92□□□□□ -1.14
IRF3-220ENST00000598108 KRTAP4-3Q9BYR4 195 aa7.92□□□□□ -1.14
IRF3-220ENST00000598108 KRTAP4-9Q9BYQ8 210 aa7.82□□□□□ -1.16
IRF3-220ENST00000598108 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
IRF3-220ENST00000598108 KRTAP23-1A1A580 65 aa7.67□□□□□ -1.18
IRF3-220ENST00000598108 LCE4AQ5TA78 99 aa7.64□□□□□ -1.19
IRF3-220ENST00000598108 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
IRF3-220ENST00000598108 LCE1DQ5T752 114 aa7.63□□□□□ -1.19
IRF3-220ENST00000598108 KRTAP5-4Q6L8H1 288 aa7.58□□□□□ -1.2
IRF3-220ENST00000598108 MT4P47944 62 aa7.57□□□□□ -1.2
IRF3-220ENST00000598108 ROMO1P60602 79 aa7.56□□□□□ -1.2
IRF3-220ENST00000598108 HMCN1Q96RW7 5635 aa7.53□□□□□ -1.2
IRF3-220ENST00000598108 GPR98Q8WXG9 6306 aa7.53□□□□□ -1.2
IRF3-220ENST00000598108 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
IRF3-220ENST00000598108 KRTAP19-4Q3LI73 84 aa7.45□□□□□ -1.22
IRF3-220ENST00000598108 KRTAP4-6Q9BYQ5 205 aa7.41□□□□□ -1.22
IRF3-220ENST00000598108 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
IRF3-220ENST00000598108 KRTAP5-5Q701N2 237 aaPredicted RBP7.38□□□□□ -1.23
IRF3-220ENST00000598108 LCE3CQ5T5A8 94 aa7.36□□□□□ -1.23
IRF3-220ENST00000598108 AHNAK2Q8IVF2 5795 aa7.22□□□□□ -1.25
IRF3-220ENST00000598108 KRTAP20-2Q3LI61 65 aa7.14□□□□□ -1.27
IRF3-220ENST00000598108 SYNE1Q8NF91 8797 aaKnown RBP7.11□□□□□ -1.27
IRF3-220ENST00000598108 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
IRF3-220ENST00000598108 SPRR5A0A1B0GTR4 108 aa7.09□□□□□ -1.27
IRF3-220ENST00000598108 KRTAP9-6A8MVA2 160 aa7□□□□□ -1.29
IRF3-220ENST00000598108 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
IRF3-220ENST00000598108 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
IRF3-220ENST00000598108 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
IRF3-220ENST00000598108 MT1AP04731 61 aa6.91□□□□□ -1.3
IRF3-220ENST00000598108 KRTAP6-1Q3LI64 71 aa6.89□□□□□ -1.31
IRF3-220ENST00000598108 KRTAP5-7Q6L8G8 165 aa6.68□□□□□ -1.34
IRF3-220ENST00000598108 KRTAP9-4Q9BYQ2 154 aa6.68□□□□□ -1.34
IRF3-220ENST00000598108 KRTAP5-2Q701N4 177 aa6.67□□□□□ -1.34
IRF3-220ENST00000598108 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
IRF3-220ENST00000598108 KRTAP6-2Q3LI66 62 aa6.54□□□□□ -1.36
IRF3-220ENST00000598108 KRTAP4-11Q9BYQ6 195 aa6.48□□□□□ -1.37
IRF3-220ENST00000598108 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
IRF3-220ENST00000598108 MT3P25713 68 aa6.3□□□□□ -1.4
IRF3-220ENST00000598108 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
IRF3-220ENST00000598108 KRTAP5-8O75690 187 aa6.26□□□□□ -1.41
IRF3-220ENST00000598108 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
IRF3-220ENST00000598108 KRTAP5-1Q6L8H4 278 aa5.97□□□□□ -1.45
IRF3-220ENST00000598108 MUC5BQ9HC84 5762 aaPredicted RBP5.9□□□□□ -1.46
IRF3-220ENST00000598108 AHNAKQ09666 5890 aaKnown RBP5.89□□□□□ -1.47
IRF3-220ENST00000598108 MUC5ACP98088 5654 aa5.87□□□□□ -1.47
IRF3-220ENST00000598108 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
IRF3-220ENST00000598108 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
IRF3-220ENST00000598108 LCE1EQ5T753 118 aa5.74□□□□□ -1.49
IRF3-220ENST00000598108 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
IRF3-220ENST00000598108 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
IRF3-220ENST00000598108 LCE1BQ5T7P3 118 aa5.42□□□□□ -1.54
IRF3-220ENST00000598108 LCE1CQ5T751 118 aa5.33□□□□□ -1.56
IRF3-220ENST00000598108 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
IRF3-220ENST00000598108 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
IRF3-220ENST00000598108 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
IRF3-220ENST00000598108 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
IRF3-220ENST00000598108 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.87□□□□□ -1.63
IRF3-220ENST00000598108 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
IRF3-220ENST00000598108 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
IRF3-220ENST00000598108 KRTAP21-2Q3LI59 83 aa4.54□□□□□ -1.68
IRF3-220ENST00000598108 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
IRF3-220ENST00000598108 PHGR1C9JFL3 82 aa4.16□□□□□ -1.74
IRF3-220ENST00000598108 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
IRF3-220ENST00000598108 PRM1P04553 51 aa3.9□□□□□ -1.79
IRF3-220ENST00000598108 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
IRF3-220ENST00000598108 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
IRF3-220ENST00000598108 INE1O15225 51 aa3.53□□□□□ -1.84
IRF3-220ENST00000598108 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
IRF3-220ENST00000598108 H3BS24 57 aa2.85□□□□□ -1.95
IRF3-220ENST00000598108 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 89.3 ms