RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
KHSRP-209ENST00000597704 MT1MQ8N339 61 aa5.64□□□□□ -1.51
KHSRP-209ENST00000597704 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
KHSRP-209ENST00000597704 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
KHSRP-209ENST00000597704 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
KHSRP-209ENST00000597704 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
KHSRP-209ENST00000597704 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
KHSRP-209ENST00000597704 V9GYY9 64 aa5.47□□□□□ -1.53
KHSRP-209ENST00000597704 PSPHP1O15172 72 aa5.46□□□□□ -1.54
KHSRP-209ENST00000597704 Q1T7F1 81 aa5.46□□□□□ -1.54
KHSRP-209ENST00000597704 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
KHSRP-209ENST00000597704 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
KHSRP-209ENST00000597704 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
KHSRP-209ENST00000597704 K7ERS5 55 aa5.4□□□□□ -1.54
KHSRP-209ENST00000597704 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
KHSRP-209ENST00000597704 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
KHSRP-209ENST00000597704 MT4P47944 62 aa5.35□□□□□ -1.55
KHSRP-209ENST00000597704 A6NED7 52 aa5.26□□□□□ -1.57
KHSRP-209ENST00000597704 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
KHSRP-209ENST00000597704 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
KHSRP-209ENST00000597704 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
KHSRP-209ENST00000597704 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
KHSRP-209ENST00000597704 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
KHSRP-209ENST00000597704 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
KHSRP-209ENST00000597704 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
KHSRP-209ENST00000597704 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
KHSRP-209ENST00000597704 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
KHSRP-209ENST00000597704 ROMO1P60602 79 aa5.07□□□□□ -1.6
KHSRP-209ENST00000597704 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
KHSRP-209ENST00000597704 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
KHSRP-209ENST00000597704 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
KHSRP-209ENST00000597704 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
KHSRP-209ENST00000597704 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
KHSRP-209ENST00000597704 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
KHSRP-209ENST00000597704 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
KHSRP-209ENST00000597704 MT1AP04731 61 aa4.82□□□□□ -1.64
KHSRP-209ENST00000597704 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
KHSRP-209ENST00000597704 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
KHSRP-209ENST00000597704 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
KHSRP-209ENST00000597704 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
KHSRP-209ENST00000597704 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
KHSRP-209ENST00000597704 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
KHSRP-209ENST00000597704 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.67
KHSRP-209ENST00000597704 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
KHSRP-209ENST00000597704 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
KHSRP-209ENST00000597704 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
KHSRP-209ENST00000597704 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
KHSRP-209ENST00000597704 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
KHSRP-209ENST00000597704 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
KHSRP-209ENST00000597704 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
KHSRP-209ENST00000597704 MT3P25713 68 aa4.39□□□□□ -1.71
KHSRP-209ENST00000597704 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
KHSRP-209ENST00000597704 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
KHSRP-209ENST00000597704 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
KHSRP-209ENST00000597704 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
KHSRP-209ENST00000597704 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
KHSRP-209ENST00000597704 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
KHSRP-209ENST00000597704 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
KHSRP-209ENST00000597704 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
KHSRP-209ENST00000597704 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
KHSRP-209ENST00000597704 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
KHSRP-209ENST00000597704 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
KHSRP-209ENST00000597704 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
KHSRP-209ENST00000597704 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
KHSRP-209ENST00000597704 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
KHSRP-209ENST00000597704 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
KHSRP-209ENST00000597704 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
KHSRP-209ENST00000597704 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
KHSRP-209ENST00000597704 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
KHSRP-209ENST00000597704 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
KHSRP-209ENST00000597704 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
KHSRP-209ENST00000597704 H3BS24 57 aa2.8□□□□□ -1.96
KHSRP-209ENST00000597704 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
KHSRP-209ENST00000597704 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
KHSRP-209ENST00000597704 INE1O15225 51 aa2.63□□□□□ -1.99
KHSRP-209ENST00000597704 PRM1P04553 51 aa2.6□□□□□ -1.99
KHSRP-209ENST00000597704 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
KHSRP-209ENST00000597704 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 83 ms