RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
CHMP2A-203ENST00000597209 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
CHMP2A-203ENST00000597209 UQCR11O14957 56 aa6.17□□□□□ -1.42
CHMP2A-203ENST00000597209 TMEM258P61165 79 aa6.17□□□□□ -1.42
CHMP2A-203ENST00000597209 KRTAP5-4Q6L8H1 288 aa6.15□□□□□ -1.42
CHMP2A-203ENST00000597209 MT4P47944 62 aa6.14□□□□□ -1.43
CHMP2A-203ENST00000597209 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
CHMP2A-203ENST00000597209 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
CHMP2A-203ENST00000597209 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
CHMP2A-203ENST00000597209 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
CHMP2A-203ENST00000597209 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
CHMP2A-203ENST00000597209 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
CHMP2A-203ENST00000597209 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
CHMP2A-203ENST00000597209 K7ERS5 55 aa5.92□□□□□ -1.46
CHMP2A-203ENST00000597209 V9GYY9 64 aa5.89□□□□□ -1.47
CHMP2A-203ENST00000597209 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
CHMP2A-203ENST00000597209 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
CHMP2A-203ENST00000597209 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
CHMP2A-203ENST00000597209 Q1T7F1 81 aa5.84□□□□□ -1.47
CHMP2A-203ENST00000597209 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
CHMP2A-203ENST00000597209 PSPHP1O15172 72 aa5.82□□□□□ -1.48
CHMP2A-203ENST00000597209 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
CHMP2A-203ENST00000597209 KRTAP20-2Q3LI61 65 aa5.78□□□□□ -1.48
CHMP2A-203ENST00000597209 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
CHMP2A-203ENST00000597209 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
CHMP2A-203ENST00000597209 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
CHMP2A-203ENST00000597209 KRTAP5-3Q6L8H2 238 aa5.71□□□□□ -1.5
CHMP2A-203ENST00000597209 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
CHMP2A-203ENST00000597209 KRTAP5-7Q6L8G8 165 aa5.65□□□□□ -1.5
CHMP2A-203ENST00000597209 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
CHMP2A-203ENST00000597209 A6NED7 52 aa5.63□□□□□ -1.51
CHMP2A-203ENST00000597209 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
CHMP2A-203ENST00000597209 ROMO1P60602 79 aa5.5□□□□□ -1.53
CHMP2A-203ENST00000597209 RPS28P62857 69 aaKnown RBP5.45□□□□□ -1.54
CHMP2A-203ENST00000597209 MT1AP04731 61 aa5.44□□□□□ -1.54
CHMP2A-203ENST00000597209 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
CHMP2A-203ENST00000597209 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
CHMP2A-203ENST00000597209 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
CHMP2A-203ENST00000597209 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
CHMP2A-203ENST00000597209 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
CHMP2A-203ENST00000597209 PCP4P48539 62 aa5.19□□□□□ -1.58
CHMP2A-203ENST00000597209 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
CHMP2A-203ENST00000597209 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
CHMP2A-203ENST00000597209 MT3P25713 68 aa4.99□□□□□ -1.61
CHMP2A-203ENST00000597209 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
CHMP2A-203ENST00000597209 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
CHMP2A-203ENST00000597209 MUC5ACP98088 5654 aa4.9□□□□□ -1.62
CHMP2A-203ENST00000597209 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
CHMP2A-203ENST00000597209 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
CHMP2A-203ENST00000597209 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
CHMP2A-203ENST00000597209 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
CHMP2A-203ENST00000597209 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
CHMP2A-203ENST00000597209 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
CHMP2A-203ENST00000597209 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
CHMP2A-203ENST00000597209 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
CHMP2A-203ENST00000597209 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
CHMP2A-203ENST00000597209 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
CHMP2A-203ENST00000597209 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
CHMP2A-203ENST00000597209 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
CHMP2A-203ENST00000597209 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
CHMP2A-203ENST00000597209 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
CHMP2A-203ENST00000597209 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
CHMP2A-203ENST00000597209 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
CHMP2A-203ENST00000597209 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
CHMP2A-203ENST00000597209 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CHMP2A-203ENST00000597209 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CHMP2A-203ENST00000597209 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
CHMP2A-203ENST00000597209 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
CHMP2A-203ENST00000597209 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
CHMP2A-203ENST00000597209 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CHMP2A-203ENST00000597209 H3BS24 57 aa3.11□□□□□ -1.91
CHMP2A-203ENST00000597209 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
CHMP2A-203ENST00000597209 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
CHMP2A-203ENST00000597209 PRM1P04553 51 aa2.79□□□□□ -1.96
CHMP2A-203ENST00000597209 A0A0A0MQY5 61 aa2.71□□□□□ -1.98
CHMP2A-203ENST00000597209 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
CHMP2A-203ENST00000597209 INE1O15225 51 aa2.45□□□□□ -2.02
CHMP2A-203ENST00000597209 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 140.1 ms