RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 MT1EP04732 61 aa8.09□□□□□ -1.12
SPTBN4-209ENST00000596411 KMT2DO14686 5537 aa8.08□□□□□ -1.12
SPTBN4-209ENST00000596411 INE1O15225 51 aa8.07□□□□□ -1.12
SPTBN4-209ENST00000596411 MT1LQ93083 61 aa8.05□□□□□ -1.12
SPTBN4-209ENST00000596411 MACF1Q9UPN3 7388 aaKnown RBP8.05□□□□□ -1.12
SPTBN4-209ENST00000596411 KRTAP9-6A8MVA2 160 aa8□□□□□ -1.13
SPTBN4-209ENST00000596411 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
SPTBN4-209ENST00000596411 KRTAP2-3P0C7H8 128 aa7.8□□□□□ -1.16
SPTBN4-209ENST00000596411 KRTAP2-4Q9BYR9 128 aa7.8□□□□□ -1.16
SPTBN4-209ENST00000596411 KRTAP2-1Q9BYU5 128 aa7.8□□□□□ -1.16
SPTBN4-209ENST00000596411 KRTAP6-3Q3LI67 103 aa7.74□□□□□ -1.17
SPTBN4-209ENST00000596411 NEBP20929 6669 aa7.61□□□□□ -1.19
SPTBN4-209ENST00000596411 KRTAP19-3Q7Z4W3 81 aa7.61□□□□□ -1.19
SPTBN4-209ENST00000596411 MT1GP13640 62 aa7.6□□□□□ -1.19
SPTBN4-209ENST00000596411 MT1MQ8N339 61 aa7.55□□□□□ -1.2
SPTBN4-209ENST00000596411 MUC12Q9UKN1 5478 aa7.53□□□□□ -1.2
SPTBN4-209ENST00000596411 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.22
SPTBN4-209ENST00000596411 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
SPTBN4-209ENST00000596411 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
SPTBN4-209ENST00000596411 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
SPTBN4-209ENST00000596411 SPRR2FQ96RM1 72 aa7.29□□□□□ -1.24
SPTBN4-209ENST00000596411 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
SPTBN4-209ENST00000596411 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
SPTBN4-209ENST00000596411 LCE1AQ5T7P2 110 aa6.92□□□□□ -1.3
SPTBN4-209ENST00000596411 KRTAP2-2Q9BYT5 123 aa6.85□□□□□ -1.31
SPTBN4-209ENST00000596411 MT1AP04731 61 aa6.83□□□□□ -1.32
SPTBN4-209ENST00000596411 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
SPTBN4-209ENST00000596411 SPRR2EP22531 72 aa6.77□□□□□ -1.33
SPTBN4-209ENST00000596411 SPRR2BP35325 72 aa6.77□□□□□ -1.33
SPTBN4-209ENST00000596411 SPRR2AP35326 72 aa6.77□□□□□ -1.33
SPTBN4-209ENST00000596411 KRTAP6-1Q3LI64 71 aa6.76□□□□□ -1.33
SPTBN4-209ENST00000596411 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
SPTBN4-209ENST00000596411 KRTAP12-4P60329 112 aa6.71□□□□□ -1.34
SPTBN4-209ENST00000596411 GPR98Q8WXG9 6306 aa6.63□□□□□ -1.35
SPTBN4-209ENST00000596411 DSTQ03001 7570 aaKnown RBP6.62□□□□□ -1.35
SPTBN4-209ENST00000596411 SPRR2DP22532 72 aa6.55□□□□□ -1.36
SPTBN4-209ENST00000596411 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
SPTBN4-209ENST00000596411 LCE3DQ9BYE3 92 aa6.43□□□□□ -1.38
SPTBN4-209ENST00000596411 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
SPTBN4-209ENST00000596411 LCE3EQ5T5B0 92 aa6.35□□□□□ -1.39
SPTBN4-209ENST00000596411 SYNE1Q8NF91 8797 aaKnown RBP6.28□□□□□ -1.4
SPTBN4-209ENST00000596411 MT3P25713 68 aa6.13□□□□□ -1.43
SPTBN4-209ENST00000596411 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.44
SPTBN4-209ENST00000596411 KRTAP6-2Q3LI66 62 aa6.07□□□□□ -1.44
SPTBN4-209ENST00000596411 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
SPTBN4-209ENST00000596411 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
SPTBN4-209ENST00000596411 AHNAK2Q8IVF2 5795 aa5.94□□□□□ -1.46
SPTBN4-209ENST00000596411 PRM1P04553 51 aa5.9□□□□□ -1.47
SPTBN4-209ENST00000596411 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
SPTBN4-209ENST00000596411 MT4P47944 62 aa5.79□□□□□ -1.48
SPTBN4-209ENST00000596411 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
SPTBN4-209ENST00000596411 KRTAP5-7Q6L8G8 165 aa5.75□□□□□ -1.49
SPTBN4-209ENST00000596411 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
SPTBN4-209ENST00000596411 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
SPTBN4-209ENST00000596411 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
SPTBN4-209ENST00000596411 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
SPTBN4-209ENST00000596411 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
SPTBN4-209ENST00000596411 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
SPTBN4-209ENST00000596411 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
SPTBN4-209ENST00000596411 MUC5ACP98088 5654 aa5.01□□□□□ -1.61
SPTBN4-209ENST00000596411 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
SPTBN4-209ENST00000596411 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
SPTBN4-209ENST00000596411 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
SPTBN4-209ENST00000596411 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
SPTBN4-209ENST00000596411 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
SPTBN4-209ENST00000596411 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
SPTBN4-209ENST00000596411 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
SPTBN4-209ENST00000596411 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
SPTBN4-209ENST00000596411 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
SPTBN4-209ENST00000596411 KRTAP21-2Q3LI59 83 aa4.43□□□□□ -1.7
SPTBN4-209ENST00000596411 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
SPTBN4-209ENST00000596411 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SPTBN4-209ENST00000596411 KRTAP21-1Q3LI58 79 aa3.8□□□□□ -1.8
SPTBN4-209ENST00000596411 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
SPTBN4-209ENST00000596411 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
SPTBN4-209ENST00000596411 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
SPTBN4-209ENST00000596411 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SPTBN4-209ENST00000596411 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 58.6 ms