RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 A8MU10 97 aa5.4□□□□□ -1.54
LINC02560-201ENST00000596379 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
LINC02560-201ENST00000596379 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
LINC02560-201ENST00000596379 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
LINC02560-201ENST00000596379 A0A1B0GU69 56 aa5.34□□□□□ -1.55
LINC02560-201ENST00000596379 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
LINC02560-201ENST00000596379 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
LINC02560-201ENST00000596379 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
LINC02560-201ENST00000596379 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
LINC02560-201ENST00000596379 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
LINC02560-201ENST00000596379 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
LINC02560-201ENST00000596379 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
LINC02560-201ENST00000596379 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
LINC02560-201ENST00000596379 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
LINC02560-201ENST00000596379 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
LINC02560-201ENST00000596379 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
LINC02560-201ENST00000596379 TMEM258P61165 79 aa5.04□□□□□ -1.6
LINC02560-201ENST00000596379 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
LINC02560-201ENST00000596379 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
LINC02560-201ENST00000596379 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
LINC02560-201ENST00000596379 UQCR11O14957 56 aa4.91□□□□□ -1.62
LINC02560-201ENST00000596379 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
LINC02560-201ENST00000596379 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
LINC02560-201ENST00000596379 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
LINC02560-201ENST00000596379 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
LINC02560-201ENST00000596379 MT1AP04731 61 aa4.79□□□□□ -1.64
LINC02560-201ENST00000596379 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
LINC02560-201ENST00000596379 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
LINC02560-201ENST00000596379 V9GYY9 64 aa4.76□□□□□ -1.65
LINC02560-201ENST00000596379 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
LINC02560-201ENST00000596379 Q1T7F1 81 aa4.75□□□□□ -1.65
LINC02560-201ENST00000596379 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
LINC02560-201ENST00000596379 K7ERS5 55 aa4.73□□□□□ -1.65
LINC02560-201ENST00000596379 PCP4P48539 62 aa4.73□□□□□ -1.65
LINC02560-201ENST00000596379 PSPHP1O15172 72 aa4.7□□□□□ -1.66
LINC02560-201ENST00000596379 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
LINC02560-201ENST00000596379 AHNAKQ09666 5890 aaKnown RBP4.65□□□□□ -1.66
LINC02560-201ENST00000596379 MUC5ACP98088 5654 aa4.65□□□□□ -1.66
LINC02560-201ENST00000596379 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
LINC02560-201ENST00000596379 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
LINC02560-201ENST00000596379 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
LINC02560-201ENST00000596379 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
LINC02560-201ENST00000596379 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
LINC02560-201ENST00000596379 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
LINC02560-201ENST00000596379 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
LINC02560-201ENST00000596379 A6NED7 52 aa4.54□□□□□ -1.68
LINC02560-201ENST00000596379 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
LINC02560-201ENST00000596379 MT3P25713 68 aa4.4□□□□□ -1.71
LINC02560-201ENST00000596379 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
LINC02560-201ENST00000596379 ROMO1P60602 79 aa4.37□□□□□ -1.71
LINC02560-201ENST00000596379 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
LINC02560-201ENST00000596379 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
LINC02560-201ENST00000596379 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
LINC02560-201ENST00000596379 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
LINC02560-201ENST00000596379 PRO0628Q9UI54 55 aa3.86□□□□□ -1.79
LINC02560-201ENST00000596379 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
LINC02560-201ENST00000596379 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
LINC02560-201ENST00000596379 H3BS24 57 aa3.72□□□□□ -1.81
LINC02560-201ENST00000596379 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
LINC02560-201ENST00000596379 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
LINC02560-201ENST00000596379 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
LINC02560-201ENST00000596379 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
LINC02560-201ENST00000596379 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
LINC02560-201ENST00000596379 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
LINC02560-201ENST00000596379 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
LINC02560-201ENST00000596379 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
LINC02560-201ENST00000596379 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
LINC02560-201ENST00000596379 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
LINC02560-201ENST00000596379 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
LINC02560-201ENST00000596379 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
LINC02560-201ENST00000596379 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
LINC02560-201ENST00000596379 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
LINC02560-201ENST00000596379 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
LINC02560-201ENST00000596379 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
LINC02560-201ENST00000596379 INE1O15225 51 aa2.4□□□□□ -2.03
LINC02560-201ENST00000596379 PRM1P04553 51 aa2.23□□□□□ -2.05
LINC02560-201ENST00000596379 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 169.4 ms