RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 TMEM258P61165 79 aa8.86□□□□□ -0.99
ZNF558-203ENST00000595786 LCE1DQ5T752 114 aa8.83□□□□□ -1
ZNF558-203ENST00000595786 UQCR11O14957 56 aa8.79□□□□□ -1
ZNF558-203ENST00000595786 KRTAP4-3Q9BYR4 195 aa8.73□□□□□ -1.01
ZNF558-203ENST00000595786 HMCN1Q96RW7 5635 aa8.71□□□□□ -1.02
ZNF558-203ENST00000595786 MT4P47944 62 aa8.69□□□□□ -1.02
ZNF558-203ENST00000595786 KRTAP12-3P60328 96 aa8.69□□□□□ -1.02
ZNF558-203ENST00000595786 KRTAP5-4Q6L8H1 288 aa8.69□□□□□ -1.02
ZNF558-203ENST00000595786 MIR22HGQ0VDD5 57 aa8.55□□□□□ -1.04
ZNF558-203ENST00000595786 KRTAP25-1Q3LHN0 102 aa8.54□□□□□ -1.04
ZNF558-203ENST00000595786 KRTAP4-7Q9BYR0 210 aa8.51□□□□□ -1.05
ZNF558-203ENST00000595786 PCP4P48539 62 aa8.47□□□□□ -1.05
ZNF558-203ENST00000595786 K7ERS5 55 aa8.46□□□□□ -1.06
ZNF558-203ENST00000595786 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.06
ZNF558-203ENST00000595786 AHNAK2Q8IVF2 5795 aa8.44□□□□□ -1.06
ZNF558-203ENST00000595786 V9GYY9 64 aa8.4□□□□□ -1.06
ZNF558-203ENST00000595786 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
ZNF558-203ENST00000595786 Q1T7F1 81 aa8.3□□□□□ -1.08
ZNF558-203ENST00000595786 RPS28P62857 69 aaKnown RBP8.29□□□□□ -1.08
ZNF558-203ENST00000595786 KRTAP5-5Q701N2 237 aaPredicted RBP8.29□□□□□ -1.08
ZNF558-203ENST00000595786 KRTAP23-1A1A580 65 aa8.28□□□□□ -1.08
ZNF558-203ENST00000595786 PSPHP1O15172 72 aa8.28□□□□□ -1.08
ZNF558-203ENST00000595786 KRTAP5-10Q6L8G5 202 aa8.27□□□□□ -1.09
ZNF558-203ENST00000595786 SPRR5A0A1B0GTR4 108 aa8.18□□□□□ -1.1
ZNF558-203ENST00000595786 KRTAP20-2Q3LI61 65 aa8.17□□□□□ -1.1
ZNF558-203ENST00000595786 KRTAP12-4P60329 112 aa8.14□□□□□ -1.11
ZNF558-203ENST00000595786 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
ZNF558-203ENST00000595786 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
ZNF558-203ENST00000595786 KRTAP5-3Q6L8H2 238 aa8.07□□□□□ -1.12
ZNF558-203ENST00000595786 A6NED7 52 aa8.02□□□□□ -1.13
ZNF558-203ENST00000595786 SYNE1Q8NF91 8797 aaKnown RBP8.01□□□□□ -1.13
ZNF558-203ENST00000595786 LCE3CQ5T5A8 94 aa8□□□□□ -1.13
ZNF558-203ENST00000595786 KRTAP5-7Q6L8G8 165 aa7.99□□□□□ -1.13
ZNF558-203ENST00000595786 CDC42SE1Q9NRR8 79 aa7.96□□□□□ -1.14
ZNF558-203ENST00000595786 ROMO1P60602 79 aa7.83□□□□□ -1.16
ZNF558-203ENST00000595786 MT1AP04731 61 aa7.7□□□□□ -1.18
ZNF558-203ENST00000595786 KRTAP6-1Q3LI64 71 aa7.62□□□□□ -1.19
ZNF558-203ENST00000595786 KRTAP5-2Q701N4 177 aa7.59□□□□□ -1.19
ZNF558-203ENST00000595786 KRTAP9-6A8MVA2 160 aa7.5□□□□□ -1.21
ZNF558-203ENST00000595786 KRTAP4-11Q9BYQ6 195 aa7.5□□□□□ -1.21
ZNF558-203ENST00000595786 KRTAP9-4Q9BYQ2 154 aa7.46□□□□□ -1.22
ZNF558-203ENST00000595786 KRTAP6-2Q3LI66 62 aa7.3□□□□□ -1.24
ZNF558-203ENST00000595786 KRTAP5-8O75690 187 aa7.23□□□□□ -1.25
ZNF558-203ENST00000595786 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
ZNF558-203ENST00000595786 OBSCNQ5VST9 7968 aa7.11□□□□□ -1.27
ZNF558-203ENST00000595786 MT3P25713 68 aa7.08□□□□□ -1.28
ZNF558-203ENST00000595786 AHNAKQ09666 5890 aaKnown RBP6.98□□□□□ -1.29
ZNF558-203ENST00000595786 MUC5BQ9HC84 5762 aaPredicted RBP6.97□□□□□ -1.29
ZNF558-203ENST00000595786 MUC5ACP98088 5654 aa6.93□□□□□ -1.3
ZNF558-203ENST00000595786 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
ZNF558-203ENST00000595786 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
ZNF558-203ENST00000595786 KRTAP5-1Q6L8H4 278 aa6.81□□□□□ -1.32
ZNF558-203ENST00000595786 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
ZNF558-203ENST00000595786 LCE1EQ5T753 118 aa6.55□□□□□ -1.36
ZNF558-203ENST00000595786 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
ZNF558-203ENST00000595786 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
ZNF558-203ENST00000595786 KRTAP4-2Q9BYR5 136 aa6.13□□□□□ -1.43
ZNF558-203ENST00000595786 LCE1CQ5T751 118 aa6.07□□□□□ -1.44
ZNF558-203ENST00000595786 LCE1BQ5T7P3 118 aa6.07□□□□□ -1.44
ZNF558-203ENST00000595786 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
ZNF558-203ENST00000595786 LCE3DQ9BYE3 92 aa5.76□□□□□ -1.49
ZNF558-203ENST00000595786 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
ZNF558-203ENST00000595786 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.52□□□□□ -1.53
ZNF558-203ENST00000595786 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
ZNF558-203ENST00000595786 KRTAP5-11Q6L8G4 156 aa5.49□□□□□ -1.53
ZNF558-203ENST00000595786 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
ZNF558-203ENST00000595786 LCE1FQ5T754 118 aa5.41□□□□□ -1.54
ZNF558-203ENST00000595786 KRTAP21-2Q3LI59 83 aa5.04□□□□□ -1.6
ZNF558-203ENST00000595786 PHGR1C9JFL3 82 aa4.8□□□□□ -1.64
ZNF558-203ENST00000595786 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
ZNF558-203ENST00000595786 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
ZNF558-203ENST00000595786 MUC19Q7Z5P9 8384 aa4.4□□□□□ -1.71
ZNF558-203ENST00000595786 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
ZNF558-203ENST00000595786 INE1O15225 51 aa4.01□□□□□ -1.77
ZNF558-203ENST00000595786 PRM1P04553 51 aa3.95□□□□□ -1.78
ZNF558-203ENST00000595786 KRTAP21-1Q3LI58 79 aa3.69□□□□□ -1.82
ZNF558-203ENST00000595786 H3BS24 57 aa3.34□□□□□ -1.87
ZNF558-203ENST00000595786 MUC16Q8WXI7 14507 aa3.14□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 38.9 ms