RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 MIR22HGQ0VDD5 57 aa7.77□□□□□ -1.17
GTF2F1-204ENST00000594965 KRTAP4-3Q9BYR4 195 aa7.76□□□□□ -1.17
GTF2F1-204ENST00000594965 KRTAP12-3P60328 96 aa7.7□□□□□ -1.18
GTF2F1-204ENST00000594965 PSPHP1O15172 72 aa7.66□□□□□ -1.18
GTF2F1-204ENST00000594965 Q1T7F1 81 aa7.65□□□□□ -1.18
GTF2F1-204ENST00000594965 V9GYY9 64 aa7.65□□□□□ -1.18
GTF2F1-204ENST00000594965 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
GTF2F1-204ENST00000594965 LCE4AQ5TA78 99 aa7.62□□□□□ -1.19
GTF2F1-204ENST00000594965 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
GTF2F1-204ENST00000594965 KRTAP4-7Q9BYR0 210 aa7.6□□□□□ -1.19
GTF2F1-204ENST00000594965 K7ERS5 55 aa7.55□□□□□ -1.2
GTF2F1-204ENST00000594965 KRTAP5-4Q6L8H1 288 aa7.54□□□□□ -1.2
GTF2F1-204ENST00000594965 MT4P47944 62 aa7.53□□□□□ -1.2
GTF2F1-204ENST00000594965 A6NED7 52 aa7.37□□□□□ -1.23
GTF2F1-204ENST00000594965 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
GTF2F1-204ENST00000594965 GPR98Q8WXG9 6306 aa7.37□□□□□ -1.23
GTF2F1-204ENST00000594965 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
GTF2F1-204ENST00000594965 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
GTF2F1-204ENST00000594965 KRTAP5-5Q701N2 237 aaPredicted RBP7.28□□□□□ -1.24
GTF2F1-204ENST00000594965 RPS28P62857 69 aaKnown RBP7.26□□□□□ -1.25
GTF2F1-204ENST00000594965 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
GTF2F1-204ENST00000594965 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
GTF2F1-204ENST00000594965 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
GTF2F1-204ENST00000594965 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
GTF2F1-204ENST00000594965 PCP4P48539 62 aa7.15□□□□□ -1.26
GTF2F1-204ENST00000594965 ROMO1P60602 79 aa7.11□□□□□ -1.27
GTF2F1-204ENST00000594965 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
GTF2F1-204ENST00000594965 KRTAP20-2Q3LI61 65 aa7.09□□□□□ -1.27
GTF2F1-204ENST00000594965 KRTAP5-10Q6L8G5 202 aa7.08□□□□□ -1.28
GTF2F1-204ENST00000594965 AHNAK2Q8IVF2 5795 aa7.08□□□□□ -1.28
GTF2F1-204ENST00000594965 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
GTF2F1-204ENST00000594965 KRTAP12-4P60329 112 aa7□□□□□ -1.29
GTF2F1-204ENST00000594965 SYNE1Q8NF91 8797 aaKnown RBP6.93□□□□□ -1.3
GTF2F1-204ENST00000594965 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
GTF2F1-204ENST00000594965 KRTAP5-7Q6L8G8 165 aa6.77□□□□□ -1.33
GTF2F1-204ENST00000594965 KRTAP9-6A8MVA2 160 aa6.76□□□□□ -1.33
GTF2F1-204ENST00000594965 MT1AP04731 61 aa6.76□□□□□ -1.33
GTF2F1-204ENST00000594965 KRTAP6-1Q3LI64 71 aa6.75□□□□□ -1.33
GTF2F1-204ENST00000594965 KRTAP5-2Q701N4 177 aa6.62□□□□□ -1.35
GTF2F1-204ENST00000594965 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
GTF2F1-204ENST00000594965 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
GTF2F1-204ENST00000594965 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
GTF2F1-204ENST00000594965 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
GTF2F1-204ENST00000594965 KRTAP5-8O75690 187 aa6.26□□□□□ -1.41
GTF2F1-204ENST00000594965 MT3P25713 68 aa6.16□□□□□ -1.42
GTF2F1-204ENST00000594965 OBSCNQ5VST9 7968 aa6□□□□□ -1.45
GTF2F1-204ENST00000594965 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
GTF2F1-204ENST00000594965 KRTAP5-1Q6L8H4 278 aa5.92□□□□□ -1.46
GTF2F1-204ENST00000594965 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
GTF2F1-204ENST00000594965 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
GTF2F1-204ENST00000594965 MUC5BQ9HC84 5762 aaPredicted RBP5.78□□□□□ -1.48
GTF2F1-204ENST00000594965 MUC5ACP98088 5654 aa5.76□□□□□ -1.49
GTF2F1-204ENST00000594965 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
GTF2F1-204ENST00000594965 LCE1EQ5T753 118 aa5.65□□□□□ -1.5
GTF2F1-204ENST00000594965 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
GTF2F1-204ENST00000594965 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
GTF2F1-204ENST00000594965 LCE1BQ5T7P3 118 aa5.31□□□□□ -1.56
GTF2F1-204ENST00000594965 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
GTF2F1-204ENST00000594965 LCE1CQ5T751 118 aa5.25□□□□□ -1.57
GTF2F1-204ENST00000594965 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
GTF2F1-204ENST00000594965 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
GTF2F1-204ENST00000594965 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
GTF2F1-204ENST00000594965 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
GTF2F1-204ENST00000594965 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
GTF2F1-204ENST00000594965 LUZP6Q538Z0 58 aa4.8□□□□□ -1.64
GTF2F1-204ENST00000594965 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
GTF2F1-204ENST00000594965 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
GTF2F1-204ENST00000594965 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
GTF2F1-204ENST00000594965 PHGR1C9JFL3 82 aa4.11□□□□□ -1.75
GTF2F1-204ENST00000594965 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
GTF2F1-204ENST00000594965 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
GTF2F1-204ENST00000594965 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
GTF2F1-204ENST00000594965 PRM1P04553 51 aa3.66□□□□□ -1.82
GTF2F1-204ENST00000594965 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
GTF2F1-204ENST00000594965 INE1O15225 51 aa3.05□□□□□ -1.92
GTF2F1-204ENST00000594965 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
GTF2F1-204ENST00000594965 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
GTF2F1-204ENST00000594965 H3BS24 57 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms