RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 V9GYY9 64 aa6.24□□□□□ -1.41
IRF3-208ENST00000594387 K7ERS5 55 aa6.23□□□□□ -1.41
IRF3-208ENST00000594387 MT1LQ93083 61 aa6.16□□□□□ -1.42
IRF3-208ENST00000594387 PSPHP1O15172 72 aa6.13□□□□□ -1.43
IRF3-208ENST00000594387 MT1MQ8N339 61 aa6.13□□□□□ -1.43
IRF3-208ENST00000594387 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
IRF3-208ENST00000594387 Q1T7F1 81 aa6.11□□□□□ -1.43
IRF3-208ENST00000594387 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
IRF3-208ENST00000594387 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
IRF3-208ENST00000594387 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
IRF3-208ENST00000594387 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
IRF3-208ENST00000594387 A6NED7 52 aa5.98□□□□□ -1.45
IRF3-208ENST00000594387 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
IRF3-208ENST00000594387 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
IRF3-208ENST00000594387 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
IRF3-208ENST00000594387 MT4P47944 62 aa5.87□□□□□ -1.47
IRF3-208ENST00000594387 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
IRF3-208ENST00000594387 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
IRF3-208ENST00000594387 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
IRF3-208ENST00000594387 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
IRF3-208ENST00000594387 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
IRF3-208ENST00000594387 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
IRF3-208ENST00000594387 ROMO1P60602 79 aa5.71□□□□□ -1.5
IRF3-208ENST00000594387 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
IRF3-208ENST00000594387 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
IRF3-208ENST00000594387 GPR98Q8WXG9 6306 aa5.63□□□□□ -1.51
IRF3-208ENST00000594387 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
IRF3-208ENST00000594387 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
IRF3-208ENST00000594387 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
IRF3-208ENST00000594387 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
IRF3-208ENST00000594387 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
IRF3-208ENST00000594387 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
IRF3-208ENST00000594387 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
IRF3-208ENST00000594387 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
IRF3-208ENST00000594387 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
IRF3-208ENST00000594387 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
IRF3-208ENST00000594387 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
IRF3-208ENST00000594387 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
IRF3-208ENST00000594387 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
IRF3-208ENST00000594387 MT1AP04731 61 aa5.27□□□□□ -1.57
IRF3-208ENST00000594387 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
IRF3-208ENST00000594387 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
IRF3-208ENST00000594387 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
IRF3-208ENST00000594387 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
IRF3-208ENST00000594387 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
IRF3-208ENST00000594387 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
IRF3-208ENST00000594387 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
IRF3-208ENST00000594387 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
IRF3-208ENST00000594387 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
IRF3-208ENST00000594387 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
IRF3-208ENST00000594387 MT3P25713 68 aa4.87□□□□□ -1.63
IRF3-208ENST00000594387 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
IRF3-208ENST00000594387 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
IRF3-208ENST00000594387 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
IRF3-208ENST00000594387 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
IRF3-208ENST00000594387 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
IRF3-208ENST00000594387 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
IRF3-208ENST00000594387 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
IRF3-208ENST00000594387 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
IRF3-208ENST00000594387 MUC5BQ9HC84 5762 aaPredicted RBP4.37□□□□□ -1.71
IRF3-208ENST00000594387 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
IRF3-208ENST00000594387 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
IRF3-208ENST00000594387 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
IRF3-208ENST00000594387 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
IRF3-208ENST00000594387 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
IRF3-208ENST00000594387 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
IRF3-208ENST00000594387 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
IRF3-208ENST00000594387 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
IRF3-208ENST00000594387 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
IRF3-208ENST00000594387 INE1O15225 51 aa3.66□□□□□ -1.82
IRF3-208ENST00000594387 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
IRF3-208ENST00000594387 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
IRF3-208ENST00000594387 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
IRF3-208ENST00000594387 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
IRF3-208ENST00000594387 PRM1P04553 51 aa2.9□□□□□ -1.95
IRF3-208ENST00000594387 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
IRF3-208ENST00000594387 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
IRF3-208ENST00000594387 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms