RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
COLGALT1-202ENST00000593832 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
COLGALT1-202ENST00000593832 MT1EP04732 61 aa4.74□□□□□ -1.65
COLGALT1-202ENST00000593832 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
COLGALT1-202ENST00000593832 KRTAP9-2Q9BYQ4 174 aa4.66□□□□□ -1.66
COLGALT1-202ENST00000593832 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
COLGALT1-202ENST00000593832 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
COLGALT1-202ENST00000593832 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.68
COLGALT1-202ENST00000593832 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
COLGALT1-202ENST00000593832 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
COLGALT1-202ENST00000593832 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
COLGALT1-202ENST00000593832 MT1GP13640 62 aa4.5□□□□□ -1.69
COLGALT1-202ENST00000593832 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
COLGALT1-202ENST00000593832 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
COLGALT1-202ENST00000593832 MT1MQ8N339 61 aa4.41□□□□□ -1.7
COLGALT1-202ENST00000593832 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
COLGALT1-202ENST00000593832 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
COLGALT1-202ENST00000593832 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
COLGALT1-202ENST00000593832 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
COLGALT1-202ENST00000593832 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
COLGALT1-202ENST00000593832 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
COLGALT1-202ENST00000593832 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.71
COLGALT1-202ENST00000593832 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
COLGALT1-202ENST00000593832 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
COLGALT1-202ENST00000593832 PRM1P04553 51 aa4.3□□□□□ -1.72
COLGALT1-202ENST00000593832 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
COLGALT1-202ENST00000593832 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
COLGALT1-202ENST00000593832 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
COLGALT1-202ENST00000593832 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
COLGALT1-202ENST00000593832 SPRR2EP22531 72 aa4.17□□□□□ -1.74
COLGALT1-202ENST00000593832 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
COLGALT1-202ENST00000593832 SPRR2BP35325 72 aa4.17□□□□□ -1.74
COLGALT1-202ENST00000593832 SPRR2AP35326 72 aa4.17□□□□□ -1.74
COLGALT1-202ENST00000593832 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.74
COLGALT1-202ENST00000593832 MT1AP04731 61 aa4.15□□□□□ -1.74
COLGALT1-202ENST00000593832 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
COLGALT1-202ENST00000593832 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
COLGALT1-202ENST00000593832 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
COLGALT1-202ENST00000593832 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
COLGALT1-202ENST00000593832 LCE1DQ5T752 114 aa4□□□□□ -1.77
COLGALT1-202ENST00000593832 SPRR2DP22532 72 aa3.99□□□□□ -1.77
COLGALT1-202ENST00000593832 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
COLGALT1-202ENST00000593832 NEBP20929 6669 aa3.8□□□□□ -1.8
COLGALT1-202ENST00000593832 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
COLGALT1-202ENST00000593832 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
COLGALT1-202ENST00000593832 LCE1FQ5T754 118 aa3.59□□□□□ -1.84
COLGALT1-202ENST00000593832 MT4P47944 62 aa3.57□□□□□ -1.84
COLGALT1-202ENST00000593832 MT3P25713 68 aa3.55□□□□□ -1.84
COLGALT1-202ENST00000593832 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
COLGALT1-202ENST00000593832 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
COLGALT1-202ENST00000593832 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
COLGALT1-202ENST00000593832 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
COLGALT1-202ENST00000593832 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
COLGALT1-202ENST00000593832 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
COLGALT1-202ENST00000593832 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
COLGALT1-202ENST00000593832 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
COLGALT1-202ENST00000593832 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
COLGALT1-202ENST00000593832 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
COLGALT1-202ENST00000593832 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
COLGALT1-202ENST00000593832 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
COLGALT1-202ENST00000593832 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
COLGALT1-202ENST00000593832 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
COLGALT1-202ENST00000593832 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
COLGALT1-202ENST00000593832 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
COLGALT1-202ENST00000593832 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
COLGALT1-202ENST00000593832 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
COLGALT1-202ENST00000593832 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
COLGALT1-202ENST00000593832 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
COLGALT1-202ENST00000593832 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
COLGALT1-202ENST00000593832 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
COLGALT1-202ENST00000593832 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
COLGALT1-202ENST00000593832 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
COLGALT1-202ENST00000593832 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
COLGALT1-202ENST00000593832 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
COLGALT1-202ENST00000593832 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
COLGALT1-202ENST00000593832 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
COLGALT1-202ENST00000593832 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
COLGALT1-202ENST00000593832 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 73.9 ms