RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 TNP1P09430 55 aa5.92□□□□□ -1.46
RETREG3-212ENST00000593251 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
RETREG3-212ENST00000593251 A0A1B0GU69 56 aa5.86□□□□□ -1.47
RETREG3-212ENST00000593251 A8MU10 97 aa5.86□□□□□ -1.47
RETREG3-212ENST00000593251 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
RETREG3-212ENST00000593251 COX7CP15954 63 aa5.79□□□□□ -1.48
RETREG3-212ENST00000593251 H7BZZ5 65 aa5.76□□□□□ -1.49
RETREG3-212ENST00000593251 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
RETREG3-212ENST00000593251 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
RETREG3-212ENST00000593251 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
RETREG3-212ENST00000593251 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
RETREG3-212ENST00000593251 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
RETREG3-212ENST00000593251 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
RETREG3-212ENST00000593251 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
RETREG3-212ENST00000593251 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
RETREG3-212ENST00000593251 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
RETREG3-212ENST00000593251 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
RETREG3-212ENST00000593251 ANAPC13Q9BS18 74 aa5.43□□□□□ -1.54
RETREG3-212ENST00000593251 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
RETREG3-212ENST00000593251 UQCR11O14957 56 aa5.4□□□□□ -1.54
RETREG3-212ENST00000593251 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
RETREG3-212ENST00000593251 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
RETREG3-212ENST00000593251 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
RETREG3-212ENST00000593251 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
RETREG3-212ENST00000593251 K7ERS5 55 aa5.26□□□□□ -1.57
RETREG3-212ENST00000593251 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
RETREG3-212ENST00000593251 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
RETREG3-212ENST00000593251 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
RETREG3-212ENST00000593251 MT1AP04731 61 aa5.24□□□□□ -1.57
RETREG3-212ENST00000593251 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
RETREG3-212ENST00000593251 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
RETREG3-212ENST00000593251 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
RETREG3-212ENST00000593251 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
RETREG3-212ENST00000593251 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
RETREG3-212ENST00000593251 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
RETREG3-212ENST00000593251 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
RETREG3-212ENST00000593251 TMEM258P61165 79 aa5.1□□□□□ -1.59
RETREG3-212ENST00000593251 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
RETREG3-212ENST00000593251 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
RETREG3-212ENST00000593251 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
RETREG3-212ENST00000593251 PSPHP1O15172 72 aa4.96□□□□□ -1.62
RETREG3-212ENST00000593251 V9GYY9 64 aa4.95□□□□□ -1.62
RETREG3-212ENST00000593251 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
RETREG3-212ENST00000593251 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
RETREG3-212ENST00000593251 Q1T7F1 81 aa4.89□□□□□ -1.63
RETREG3-212ENST00000593251 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
RETREG3-212ENST00000593251 MT3P25713 68 aa4.8□□□□□ -1.64
RETREG3-212ENST00000593251 A6NED7 52 aa4.79□□□□□ -1.64
RETREG3-212ENST00000593251 ROMO1P60602 79 aa4.79□□□□□ -1.64
RETREG3-212ENST00000593251 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
RETREG3-212ENST00000593251 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
RETREG3-212ENST00000593251 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
RETREG3-212ENST00000593251 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
RETREG3-212ENST00000593251 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
RETREG3-212ENST00000593251 H3BS24 57 aa4.25□□□□□ -1.73
RETREG3-212ENST00000593251 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
RETREG3-212ENST00000593251 PCP4P48539 62 aa3.97□□□□□ -1.77
RETREG3-212ENST00000593251 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
RETREG3-212ENST00000593251 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
RETREG3-212ENST00000593251 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
RETREG3-212ENST00000593251 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
RETREG3-212ENST00000593251 BRK1Q8WUW1 75 aa3.71□□□□□ -1.82
RETREG3-212ENST00000593251 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
RETREG3-212ENST00000593251 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
RETREG3-212ENST00000593251 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
RETREG3-212ENST00000593251 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
RETREG3-212ENST00000593251 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
RETREG3-212ENST00000593251 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
RETREG3-212ENST00000593251 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
RETREG3-212ENST00000593251 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
RETREG3-212ENST00000593251 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
RETREG3-212ENST00000593251 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
RETREG3-212ENST00000593251 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
RETREG3-212ENST00000593251 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
RETREG3-212ENST00000593251 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
RETREG3-212ENST00000593251 PRM1P04553 51 aa2.41□□□□□ -2.02
RETREG3-212ENST00000593251 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
RETREG3-212ENST00000593251 INE1O15225 51 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 118.3 ms