RNA–Protein interactions for RNA: ENST00000593064.5

TCF3-218, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-218ENST00000593064 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
TCF3-218ENST00000593064 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
TCF3-218ENST00000593064 MT1LQ93083 61 aa5.3□□□□□ -1.56
TCF3-218ENST00000593064 MT1EP04732 61 aa5.28□□□□□ -1.56
TCF3-218ENST00000593064 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
TCF3-218ENST00000593064 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
TCF3-218ENST00000593064 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
TCF3-218ENST00000593064 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.58
TCF3-218ENST00000593064 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.58
TCF3-218ENST00000593064 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
TCF3-218ENST00000593064 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
TCF3-218ENST00000593064 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
TCF3-218ENST00000593064 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
TCF3-218ENST00000593064 MT1GP13640 62 aa5.04□□□□□ -1.6
TCF3-218ENST00000593064 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
TCF3-218ENST00000593064 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
TCF3-218ENST00000593064 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
TCF3-218ENST00000593064 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
TCF3-218ENST00000593064 MT1MQ8N339 61 aa4.93□□□□□ -1.62
TCF3-218ENST00000593064 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
TCF3-218ENST00000593064 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
TCF3-218ENST00000593064 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
TCF3-218ENST00000593064 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
TCF3-218ENST00000593064 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
TCF3-218ENST00000593064 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
TCF3-218ENST00000593064 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
TCF3-218ENST00000593064 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
TCF3-218ENST00000593064 SPRR2EP22531 72 aa4.66□□□□□ -1.66
TCF3-218ENST00000593064 SPRR2BP35325 72 aa4.66□□□□□ -1.66
TCF3-218ENST00000593064 SPRR2AP35326 72 aa4.66□□□□□ -1.66
TCF3-218ENST00000593064 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.66
TCF3-218ENST00000593064 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
TCF3-218ENST00000593064 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
TCF3-218ENST00000593064 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
TCF3-218ENST00000593064 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
TCF3-218ENST00000593064 SPRR2DP22532 72 aa4.45□□□□□ -1.7
TCF3-218ENST00000593064 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
TCF3-218ENST00000593064 MT1AP04731 61 aa4.43□□□□□ -1.7
TCF3-218ENST00000593064 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
TCF3-218ENST00000593064 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
TCF3-218ENST00000593064 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
TCF3-218ENST00000593064 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
TCF3-218ENST00000593064 NEBP20929 6669 aa4.31□□□□□ -1.72
TCF3-218ENST00000593064 PRM1P04553 51 aa4.28□□□□□ -1.72
TCF3-218ENST00000593064 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
TCF3-218ENST00000593064 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
TCF3-218ENST00000593064 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
TCF3-218ENST00000593064 MT4P47944 62 aa4.05□□□□□ -1.76
TCF3-218ENST00000593064 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
TCF3-218ENST00000593064 MT3P25713 68 aa3.98□□□□□ -1.77
TCF3-218ENST00000593064 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
TCF3-218ENST00000593064 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
TCF3-218ENST00000593064 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
TCF3-218ENST00000593064 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
TCF3-218ENST00000593064 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
TCF3-218ENST00000593064 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
TCF3-218ENST00000593064 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
TCF3-218ENST00000593064 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
TCF3-218ENST00000593064 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
TCF3-218ENST00000593064 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
TCF3-218ENST00000593064 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
TCF3-218ENST00000593064 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
TCF3-218ENST00000593064 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
TCF3-218ENST00000593064 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
TCF3-218ENST00000593064 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
TCF3-218ENST00000593064 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
TCF3-218ENST00000593064 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
TCF3-218ENST00000593064 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
TCF3-218ENST00000593064 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
TCF3-218ENST00000593064 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
TCF3-218ENST00000593064 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
TCF3-218ENST00000593064 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
TCF3-218ENST00000593064 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
TCF3-218ENST00000593064 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
TCF3-218ENST00000593064 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
TCF3-218ENST00000593064 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
TCF3-218ENST00000593064 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
TCF3-218ENST00000593064 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms