RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 MT1LQ93083 61 aa8.28□□□□□ -1.08
MBD3-211ENST00000592965 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
MBD3-211ENST00000592965 LCE1DQ5T752 114 aa8.21□□□□□ -1.1
MBD3-211ENST00000592965 LCE3AQ5TA76 89 aa8.21□□□□□ -1.1
MBD3-211ENST00000592965 TNP1P09430 55 aa8.2□□□□□ -1.1
MBD3-211ENST00000592965 PSPHP1O15172 72 aa8.19□□□□□ -1.1
MBD3-211ENST00000592965 HMCN1Q96RW7 5635 aa8.18□□□□□ -1.1
MBD3-211ENST00000592965 LCE4AQ5TA78 99 aa8.18□□□□□ -1.1
MBD3-211ENST00000592965 MIR22HGQ0VDD5 57 aa8.16□□□□□ -1.1
MBD3-211ENST00000592965 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.1
MBD3-211ENST00000592965 MT4P47944 62 aa8.07□□□□□ -1.12
MBD3-211ENST00000592965 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
MBD3-211ENST00000592965 KRTAP5-4Q6L8H1 288 aa8.02□□□□□ -1.13
MBD3-211ENST00000592965 AHNAK2Q8IVF2 5795 aa7.95□□□□□ -1.14
MBD3-211ENST00000592965 A6NED7 52 aa7.92□□□□□ -1.14
MBD3-211ENST00000592965 K7ERS5 55 aa7.91□□□□□ -1.14
MBD3-211ENST00000592965 KRTAP12-3P60328 96 aa7.91□□□□□ -1.14
MBD3-211ENST00000592965 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
MBD3-211ENST00000592965 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
MBD3-211ENST00000592965 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
MBD3-211ENST00000592965 KRTAP5-10Q6L8G5 202 aa7.73□□□□□ -1.17
MBD3-211ENST00000592965 CDC42SE1Q9NRR8 79 aa7.67□□□□□ -1.18
MBD3-211ENST00000592965 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
MBD3-211ENST00000592965 KRTAP20-2Q3LI61 65 aa7.56□□□□□ -1.2
MBD3-211ENST00000592965 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
MBD3-211ENST00000592965 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
MBD3-211ENST00000592965 KRTAP5-3Q6L8H2 238 aa7.51□□□□□ -1.21
MBD3-211ENST00000592965 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
MBD3-211ENST00000592965 ROMO1P60602 79 aa7.48□□□□□ -1.21
MBD3-211ENST00000592965 KRTAP12-4P60329 112 aa7.46□□□□□ -1.22
MBD3-211ENST00000592965 KRTAP5-7Q6L8G8 165 aa7.45□□□□□ -1.22
MBD3-211ENST00000592965 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
MBD3-211ENST00000592965 SYNE1Q8NF91 8797 aaKnown RBP7.36□□□□□ -1.23
MBD3-211ENST00000592965 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
MBD3-211ENST00000592965 LCE3CQ5T5A8 94 aa7.26□□□□□ -1.25
MBD3-211ENST00000592965 BRK1Q8WUW1 75 aa7.16□□□□□ -1.26
MBD3-211ENST00000592965 MT1AP04731 61 aa7.05□□□□□ -1.28
MBD3-211ENST00000592965 KRTAP5-2Q701N4 177 aa7.01□□□□□ -1.29
MBD3-211ENST00000592965 KRTAP6-1Q3LI64 71 aa7□□□□□ -1.29
MBD3-211ENST00000592965 KRTAP4-11Q9BYQ6 195 aa6.94□□□□□ -1.3
MBD3-211ENST00000592965 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
MBD3-211ENST00000592965 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
MBD3-211ENST00000592965 PMAIP1Q13794 54 aa6.74□□□□□ -1.33
MBD3-211ENST00000592965 KRTAP6-2Q3LI66 62 aa6.72□□□□□ -1.33
MBD3-211ENST00000592965 KRTAP5-8O75690 187 aa6.71□□□□□ -1.34
MBD3-211ENST00000592965 AHNAKQ09666 5890 aaKnown RBP6.6□□□□□ -1.35
MBD3-211ENST00000592965 MUC5BQ9HC84 5762 aaPredicted RBP6.57□□□□□ -1.36
MBD3-211ENST00000592965 MUC5ACP98088 5654 aa6.54□□□□□ -1.36
MBD3-211ENST00000592965 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
MBD3-211ENST00000592965 OBSCNQ5VST9 7968 aa6.51□□□□□ -1.37
MBD3-211ENST00000592965 MT3P25713 68 aa6.45□□□□□ -1.38
MBD3-211ENST00000592965 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
MBD3-211ENST00000592965 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
MBD3-211ENST00000592965 KRTAP5-1Q6L8H4 278 aa6.29□□□□□ -1.4
MBD3-211ENST00000592965 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
MBD3-211ENST00000592965 LCE1EQ5T753 118 aa5.98□□□□□ -1.45
MBD3-211ENST00000592965 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
MBD3-211ENST00000592965 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
MBD3-211ENST00000592965 LCE1BQ5T7P3 118 aa5.6□□□□□ -1.51
MBD3-211ENST00000592965 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
MBD3-211ENST00000592965 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
MBD3-211ENST00000592965 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
MBD3-211ENST00000592965 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
MBD3-211ENST00000592965 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
MBD3-211ENST00000592965 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
MBD3-211ENST00000592965 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
MBD3-211ENST00000592965 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
MBD3-211ENST00000592965 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
MBD3-211ENST00000592965 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
MBD3-211ENST00000592965 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
MBD3-211ENST00000592965 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
MBD3-211ENST00000592965 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
MBD3-211ENST00000592965 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
MBD3-211ENST00000592965 PRM1P04553 51 aa3.84□□□□□ -1.79
MBD3-211ENST00000592965 INE1O15225 51 aa3.76□□□□□ -1.81
MBD3-211ENST00000592965 KRTAP21-1Q3LI58 79 aa3.43□□□□□ -1.86
MBD3-211ENST00000592965 H3BS24 57 aa3.12□□□□□ -1.91
MBD3-211ENST00000592965 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 434.8 ms