RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-240	ENST00000592815	KRTAP5-4	Q6L8H1	288 aa		5.52	□□□□□ -1.53
CIRBP-240	ENST00000592815	PRR15L	Q9BU68	103 aa		5.52	□□□□□ -1.53
CIRBP-240	ENST00000592815	AHNAK2	Q8IVF2	5795 aa		5.48	□□□□□ -1.53
CIRBP-240	ENST00000592815	KRTAP4-6	Q9BYQ5	205 aa		5.47	□□□□□ -1.53
CIRBP-240	ENST00000592815	CCDC179	H3BU77	68 aa		5.46	□□□□□ -1.54
CIRBP-240	ENST00000592815	KRTAP4-7	Q9BYR0	210 aa		5.45	□□□□□ -1.54
CIRBP-240	ENST00000592815	KRTAP12-3	P60328	96 aa		5.44	□□□□□ -1.54
CIRBP-240	ENST00000592815	LINC01558	Q9Y6Z2	57 aa		5.42	□□□□□ -1.54
CIRBP-240	ENST00000592815	ATP5E	P56381	51 aa	Predicted RBP	5.4	□□□□□ -1.54
CIRBP-240	ENST00000592815	KRTAP5-10	Q6L8G5	202 aa		5.36	□□□□□ -1.55
CIRBP-240	ENST00000592815	UQCR11	O14957	56 aa		5.32	□□□□□ -1.56
CIRBP-240	ENST00000592815	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.24	□□□□□ -1.57
CIRBP-240	ENST00000592815	KRTAP25-1	Q3LHN0	102 aa		5.23	□□□□□ -1.57
CIRBP-240	ENST00000592815	KRTAP20-2	Q3LI61	65 aa		5.23	□□□□□ -1.57
CIRBP-240	ENST00000592815	KRTAP5-3	Q6L8H2	238 aa		5.22	□□□□□ -1.57
CIRBP-240	ENST00000592815	TMEM258	P61165	79 aa		5.2	□□□□□ -1.58
CIRBP-240	ENST00000592815	MIR22HG	Q0VDD5	57 aa		5.2	□□□□□ -1.58
CIRBP-240	ENST00000592815	SPRR5	A0A1B0GTR4	108 aa		5.19	□□□□□ -1.58
CIRBP-240	ENST00000592815	KRTAP5-7	Q6L8G8	165 aa		5.18	□□□□□ -1.58
CIRBP-240	ENST00000592815	LOC100996750	A0A140TA64	210 aa		5.17	□□□□□ -1.58
CIRBP-240	ENST00000592815	KRTAP12-4	P60329	112 aa		5.17	□□□□□ -1.58
CIRBP-240	ENST00000592815		K7ERS5	55 aa		5.13	□□□□□ -1.59
CIRBP-240	ENST00000592815	KRTAP19-4	Q3LI73	84 aa		5.1	□□□□□ -1.59
CIRBP-240	ENST00000592815	SYNE1	Q8NF91	8797 aa	Known RBP	5.08	□□□□□ -1.6
CIRBP-240	ENST00000592815	PSPHP1	O15172	72 aa		5.03	□□□□□ -1.6
CIRBP-240	ENST00000592815	KRTAP15-1	Q3LI76	137 aa		5.03	□□□□□ -1.6
CIRBP-240	ENST00000592815	KRTAP23-1	A1A580	65 aa		5.02	□□□□□ -1.61
CIRBP-240	ENST00000592815	LCE3C	Q5T5A8	94 aa		5	□□□□□ -1.61
CIRBP-240	ENST00000592815		V9GYY9	64 aa		4.98	□□□□□ -1.61
CIRBP-240	ENST00000592815		Q1T7F1	81 aa		4.94	□□□□□ -1.62
CIRBP-240	ENST00000592815	MT1A	P04731	61 aa		4.85	□□□□□ -1.63
CIRBP-240	ENST00000592815		A6NED7	52 aa		4.84	□□□□□ -1.63
CIRBP-240	ENST00000592815	KRTAP6-1	Q3LI64	71 aa		4.84	□□□□□ -1.63
CIRBP-240	ENST00000592815	CDC42SE1	Q9NRR8	79 aa		4.83	□□□□□ -1.64
CIRBP-240	ENST00000592815	KRTAP4-11	Q9BYQ6	195 aa		4.82	□□□□□ -1.64
CIRBP-240	ENST00000592815	KRTAP5-2	Q701N4	177 aa		4.81	□□□□□ -1.64
CIRBP-240	ENST00000592815	ROMO1	P60602	79 aa		4.76	□□□□□ -1.65
CIRBP-240	ENST00000592815	RPS28	P62857	69 aa	Known RBP	4.76	□□□□□ -1.65
CIRBP-240	ENST00000592815	KRTAP9-6	A8MVA2	160 aa		4.72	□□□□□ -1.65
CIRBP-240	ENST00000592815	KRTAP9-4	Q9BYQ2	154 aa		4.72	□□□□□ -1.65
CIRBP-240	ENST00000592815	KRTAP6-2	Q3LI66	62 aa		4.66	□□□□□ -1.66
CIRBP-240	ENST00000592815	KRTAP5-8	O75690	187 aa		4.65	□□□□□ -1.67
CIRBP-240	ENST00000592815	AHNAK	Q09666	5890 aa	Known RBP	4.57	□□□□□ -1.68
CIRBP-240	ENST00000592815	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.53	□□□□□ -1.68
CIRBP-240	ENST00000592815	MUC5AC	P98088	5654 aa		4.52	□□□□□ -1.69
CIRBP-240	ENST00000592815	OBSCN	Q5VST9	7968 aa		4.49	□□□□□ -1.69
CIRBP-240	ENST00000592815	MT3	P25713	68 aa		4.46	□□□□□ -1.7
CIRBP-240	ENST00000592815	KRTAP9-9	Q9BYP9	154 aa		4.45	□□□□□ -1.7
CIRBP-240	ENST00000592815	KRTAP5-1	Q6L8H4	278 aa		4.34	□□□□□ -1.71
CIRBP-240	ENST00000592815	PCP4	P48539	62 aa		4.26	□□□□□ -1.73
CIRBP-240	ENST00000592815	LCE1E	Q5T753	118 aa		4.11	□□□□□ -1.75
CIRBP-240	ENST00000592815	BRK1	Q8WUW1	75 aa		3.95	□□□□□ -1.78
CIRBP-240	ENST00000592815	LCE1B	Q5T7P3	118 aa		3.92	□□□□□ -1.78
CIRBP-240	ENST00000592815	KRTAP4-2	Q9BYR5	136 aa		3.9	□□□□□ -1.79
CIRBP-240	ENST00000592815	LCE1C	Q5T751	118 aa		3.82	□□□□□ -1.8
CIRBP-240	ENST00000592815	PMAIP1	Q13794	54 aa		3.7	□□□□□ -1.82
CIRBP-240	ENST00000592815	PRAC1	Q96KF2	57 aa		3.66	□□□□□ -1.82
CIRBP-240	ENST00000592815	KRTAP4-12	Q9BQ66	201 aa		3.63	□□□□□ -1.83
CIRBP-240	ENST00000592815	LCE3D	Q9BYE3	92 aa		3.57	□□□□□ -1.84
CIRBP-240	ENST00000592815	KRTAP5-11	Q6L8G4	156 aa		3.45	□□□□□ -1.86
CIRBP-240	ENST00000592815	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.43	□□□□□ -1.86
CIRBP-240	ENST00000592815	LCE1F	Q5T754	118 aa		3.4	□□□□□ -1.87
CIRBP-240	ENST00000592815	LCE3E	Q5T5B0	92 aa		3.34	□□□□□ -1.87
CIRBP-240	ENST00000592815	KRTAP21-2	Q3LI59	83 aa		3.19	□□□□□ -1.9
CIRBP-240	ENST00000592815	PRO0628	Q9UI54	55 aa		3.19	□□□□□ -1.9
CIRBP-240	ENST00000592815	SVIP	Q8NHG7	77 aa		3.16	□□□□□ -1.9
CIRBP-240	ENST00000592815	PHGR1	C9JFL3	82 aa		3.14	□□□□□ -1.91
CIRBP-240	ENST00000592815	KTN1-AS1	Q86SY8	53 aa		3.13	□□□□□ -1.91
CIRBP-240	ENST00000592815	LUZP6	Q538Z0	58 aa		3.09	□□□□□ -1.91
CIRBP-240	ENST00000592815	KRTAP4-4	Q9BYR3	166 aa		2.98	□□□□□ -1.93
CIRBP-240	ENST00000592815	MUC19	Q7Z5P9	8384 aa		2.79	□□□□□ -1.96
CIRBP-240	ENST00000592815	PRM1	P04553	51 aa		2.42	□□□□□ -2.02
CIRBP-240	ENST00000592815	KRTAP21-1	Q3LI58	79 aa		2.38	□□□□□ -2.03
CIRBP-240	ENST00000592815	NDUFAF8	A1L188	74 aa		2.29	□□□□□ -2.04
CIRBP-240	ENST00000592815	MUC16	Q8WXI7	14507 aa		1.98	□□□□□ -2.09
CIRBP-240	ENST00000592815	INE1	O15225	51 aa		1.72	□□□□□ -2.13
CIRBP-240	ENST00000592815		A0A0A0MQY5	61 aa		1.69	□□□□□ -2.14
CIRBP-240	ENST00000592815		H3BS24	57 aa		1	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 90.8 ms