RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.58
RANBP3-229ENST00000592771 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
RANBP3-229ENST00000592771 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
RANBP3-229ENST00000592771 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
RANBP3-229ENST00000592771 MT1EP04732 61 aa5.07□□□□□ -1.6
RANBP3-229ENST00000592771 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
RANBP3-229ENST00000592771 MT1LQ93083 61 aa5.01□□□□□ -1.61
RANBP3-229ENST00000592771 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
RANBP3-229ENST00000592771 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
RANBP3-229ENST00000592771 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
RANBP3-229ENST00000592771 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
RANBP3-229ENST00000592771 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
RANBP3-229ENST00000592771 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
RANBP3-229ENST00000592771 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
RANBP3-229ENST00000592771 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
RANBP3-229ENST00000592771 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
RANBP3-229ENST00000592771 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
RANBP3-229ENST00000592771 MT1GP13640 62 aa4.78□□□□□ -1.64
RANBP3-229ENST00000592771 MT1MQ8N339 61 aa4.76□□□□□ -1.65
RANBP3-229ENST00000592771 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
RANBP3-229ENST00000592771 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
RANBP3-229ENST00000592771 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
RANBP3-229ENST00000592771 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
RANBP3-229ENST00000592771 NEBP20929 6669 aa4.68□□□□□ -1.66
RANBP3-229ENST00000592771 SPRR2EP22531 72 aa4.67□□□□□ -1.66
RANBP3-229ENST00000592771 SPRR2BP35325 72 aa4.67□□□□□ -1.66
RANBP3-229ENST00000592771 SPRR2AP35326 72 aa4.67□□□□□ -1.66
RANBP3-229ENST00000592771 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
RANBP3-229ENST00000592771 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
RANBP3-229ENST00000592771 SPRR2DP22532 72 aa4.5□□□□□ -1.69
RANBP3-229ENST00000592771 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
RANBP3-229ENST00000592771 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
RANBP3-229ENST00000592771 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
RANBP3-229ENST00000592771 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
RANBP3-229ENST00000592771 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
RANBP3-229ENST00000592771 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
RANBP3-229ENST00000592771 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
RANBP3-229ENST00000592771 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
RANBP3-229ENST00000592771 MT1AP04731 61 aa4.25□□□□□ -1.73
RANBP3-229ENST00000592771 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
RANBP3-229ENST00000592771 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
RANBP3-229ENST00000592771 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
RANBP3-229ENST00000592771 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
RANBP3-229ENST00000592771 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
RANBP3-229ENST00000592771 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
RANBP3-229ENST00000592771 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
RANBP3-229ENST00000592771 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
RANBP3-229ENST00000592771 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
RANBP3-229ENST00000592771 MT4P47944 62 aa3.93□□□□□ -1.78
RANBP3-229ENST00000592771 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
RANBP3-229ENST00000592771 MT3P25713 68 aa3.82□□□□□ -1.8
RANBP3-229ENST00000592771 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
RANBP3-229ENST00000592771 PRM1P04553 51 aa3.76□□□□□ -1.81
RANBP3-229ENST00000592771 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
RANBP3-229ENST00000592771 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
RANBP3-229ENST00000592771 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
RANBP3-229ENST00000592771 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
RANBP3-229ENST00000592771 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
RANBP3-229ENST00000592771 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
RANBP3-229ENST00000592771 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
RANBP3-229ENST00000592771 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
RANBP3-229ENST00000592771 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
RANBP3-229ENST00000592771 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
RANBP3-229ENST00000592771 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
RANBP3-229ENST00000592771 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
RANBP3-229ENST00000592771 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
RANBP3-229ENST00000592771 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
RANBP3-229ENST00000592771 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
RANBP3-229ENST00000592771 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
RANBP3-229ENST00000592771 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
RANBP3-229ENST00000592771 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
RANBP3-229ENST00000592771 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
RANBP3-229ENST00000592771 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
RANBP3-229ENST00000592771 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
RANBP3-229ENST00000592771 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
RANBP3-229ENST00000592771 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
RANBP3-229ENST00000592771 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
RANBP3-229ENST00000592771 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 152 ms