RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 PSPHP1O15172 72 aa5.63□□□□□ -1.51
LIG3-215ENST00000592690 MT1GP13640 62 aa5.63□□□□□ -1.51
LIG3-215ENST00000592690 Q1T7F1 81 aa5.61□□□□□ -1.51
LIG3-215ENST00000592690 MT1LQ93083 61 aa5.61□□□□□ -1.51
LIG3-215ENST00000592690 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
LIG3-215ENST00000592690 MT1MQ8N339 61 aa5.57□□□□□ -1.52
LIG3-215ENST00000592690 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
LIG3-215ENST00000592690 K7ERS5 55 aa5.5□□□□□ -1.53
LIG3-215ENST00000592690 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
LIG3-215ENST00000592690 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
LIG3-215ENST00000592690 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
LIG3-215ENST00000592690 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
LIG3-215ENST00000592690 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
LIG3-215ENST00000592690 GPR98Q8WXG9 6306 aa5.44□□□□□ -1.54
LIG3-215ENST00000592690 RPS28P62857 69 aaKnown RBP5.44□□□□□ -1.54
LIG3-215ENST00000592690 A6NED7 52 aa5.43□□□□□ -1.54
LIG3-215ENST00000592690 H3BS24 57 aa5.43□□□□□ -1.54
LIG3-215ENST00000592690 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
LIG3-215ENST00000592690 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
LIG3-215ENST00000592690 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
LIG3-215ENST00000592690 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
LIG3-215ENST00000592690 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
LIG3-215ENST00000592690 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
LIG3-215ENST00000592690 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
LIG3-215ENST00000592690 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
LIG3-215ENST00000592690 MT4P47944 62 aa5.24□□□□□ -1.57
LIG3-215ENST00000592690 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
LIG3-215ENST00000592690 ROMO1P60602 79 aa5.18□□□□□ -1.58
LIG3-215ENST00000592690 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
LIG3-215ENST00000592690 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
LIG3-215ENST00000592690 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
LIG3-215ENST00000592690 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
LIG3-215ENST00000592690 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
LIG3-215ENST00000592690 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
LIG3-215ENST00000592690 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
LIG3-215ENST00000592690 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
LIG3-215ENST00000592690 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
LIG3-215ENST00000592690 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
LIG3-215ENST00000592690 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
LIG3-215ENST00000592690 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
LIG3-215ENST00000592690 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
LIG3-215ENST00000592690 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
LIG3-215ENST00000592690 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
LIG3-215ENST00000592690 MT1AP04731 61 aa4.77□□□□□ -1.65
LIG3-215ENST00000592690 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
LIG3-215ENST00000592690 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
LIG3-215ENST00000592690 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
LIG3-215ENST00000592690 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
LIG3-215ENST00000592690 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
LIG3-215ENST00000592690 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
LIG3-215ENST00000592690 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
LIG3-215ENST00000592690 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
LIG3-215ENST00000592690 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
LIG3-215ENST00000592690 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
LIG3-215ENST00000592690 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
LIG3-215ENST00000592690 MT3P25713 68 aa4.33□□□□□ -1.72
LIG3-215ENST00000592690 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
LIG3-215ENST00000592690 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
LIG3-215ENST00000592690 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
LIG3-215ENST00000592690 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
LIG3-215ENST00000592690 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
LIG3-215ENST00000592690 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
LIG3-215ENST00000592690 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
LIG3-215ENST00000592690 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
LIG3-215ENST00000592690 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
LIG3-215ENST00000592690 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
LIG3-215ENST00000592690 INE1O15225 51 aa3.49□□□□□ -1.85
LIG3-215ENST00000592690 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
LIG3-215ENST00000592690 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
LIG3-215ENST00000592690 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
LIG3-215ENST00000592690 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
LIG3-215ENST00000592690 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
LIG3-215ENST00000592690 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
LIG3-215ENST00000592690 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
LIG3-215ENST00000592690 PRM1P04553 51 aa2.67□□□□□ -1.98
LIG3-215ENST00000592690 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
LIG3-215ENST00000592690 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
LIG3-215ENST00000592690 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 38.1 ms