RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	GPR98	Q8WXG9	6306 aa		5.82	□□□□□ -1.48
TMC6-223	ENST00000592594	MT1G	P13640	62 aa		5.81	□□□□□ -1.48
TMC6-223	ENST00000592594	DST	Q03001	7570 aa	Known RBP	5.81	□□□□□ -1.48
TMC6-223	ENST00000592594	RPS28	P62857	69 aa	Known RBP	5.77	□□□□□ -1.49
TMC6-223	ENST00000592594	MT1M	Q8N339	61 aa		5.77	□□□□□ -1.49
TMC6-223	ENST00000592594		A6NED7	52 aa		5.7	□□□□□ -1.5
TMC6-223	ENST00000592594	KRTAP12-3	P60328	96 aa		5.69	□□□□□ -1.5
TMC6-223	ENST00000592594	KRTAP25-1	Q3LHN0	102 aa		5.69	□□□□□ -1.5
TMC6-223	ENST00000592594		K7ERS5	55 aa		5.68	□□□□□ -1.5
TMC6-223	ENST00000592594	PP632	Q6XCG6	107 aa		5.68	□□□□□ -1.5
TMC6-223	ENST00000592594	KRTAP4-3	Q9BYR4	195 aa		5.68	□□□□□ -1.5
TMC6-223	ENST00000592594	KRTAP4-9	Q9BYQ8	210 aa		5.63	□□□□□ -1.51
TMC6-223	ENST00000592594	KRTAP4-7	Q9BYR0	210 aa		5.6	□□□□□ -1.51
TMC6-223	ENST00000592594	CDC42SE1	Q9NRR8	79 aa		5.51	□□□□□ -1.53
TMC6-223	ENST00000592594	KRTAP23-1	A1A580	65 aa		5.49	□□□□□ -1.53
TMC6-223	ENST00000592594	LCE1D	Q5T752	114 aa		5.48	□□□□□ -1.53
TMC6-223	ENST00000592594	ROMO1	P60602	79 aa		5.43	□□□□□ -1.54
TMC6-223	ENST00000592594	KRTAP5-4	Q6L8H1	288 aa		5.42	□□□□□ -1.54
TMC6-223	ENST00000592594	HMCN1	Q96RW7	5635 aa		5.42	□□□□□ -1.54
TMC6-223	ENST00000592594	LCE4A	Q5TA78	99 aa		5.41	□□□□□ -1.54
TMC6-223	ENST00000592594	MT4	P47944	62 aa		5.37	□□□□□ -1.55
TMC6-223	ENST00000592594	KRTAP15-1	Q3LI76	137 aa		5.36	□□□□□ -1.55
TMC6-223	ENST00000592594	AHNAK2	Q8IVF2	5795 aa		5.34	□□□□□ -1.55
TMC6-223	ENST00000592594	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.32	□□□□□ -1.56
TMC6-223	ENST00000592594	LOC100996750	A0A140TA64	210 aa		5.29	□□□□□ -1.56
TMC6-223	ENST00000592594	KRTAP19-4	Q3LI73	84 aa		5.28	□□□□□ -1.56
TMC6-223	ENST00000592594	KRTAP5-10	Q6L8G5	202 aa		5.28	□□□□□ -1.56
TMC6-223	ENST00000592594	KRTAP4-6	Q9BYQ5	205 aa		5.27	□□□□□ -1.57
TMC6-223	ENST00000592594	LCE3C	Q5T5A8	94 aa		5.26	□□□□□ -1.57
TMC6-223	ENST00000592594	KRTAP5-7	Q6L8G8	165 aa		5.14	□□□□□ -1.59
TMC6-223	ENST00000592594	SYNE1	Q8NF91	8797 aa	Known RBP	5.11	□□□□□ -1.59
TMC6-223	ENST00000592594	KRTAP20-2	Q3LI61	65 aa		5.09	□□□□□ -1.59
TMC6-223	ENST00000592594	KRTAP9-6	A8MVA2	160 aa		5.08	□□□□□ -1.6
TMC6-223	ENST00000592594	KRTAP5-3	Q6L8H2	238 aa		5.07	□□□□□ -1.6
TMC6-223	ENST00000592594	BRK1	Q8WUW1	75 aa		5.07	□□□□□ -1.6
TMC6-223	ENST00000592594	SPRR5	A0A1B0GTR4	108 aa		5.03	□□□□□ -1.6
TMC6-223	ENST00000592594	KRTAP12-4	P60329	112 aa		4.98	□□□□□ -1.61
TMC6-223	ENST00000592594	MT1A	P04731	61 aa		4.95	□□□□□ -1.62
TMC6-223	ENST00000592594	KRTAP6-1	Q3LI64	71 aa		4.95	□□□□□ -1.62
TMC6-223	ENST00000592594	KRTAP5-2	Q701N4	177 aa		4.81	□□□□□ -1.64
TMC6-223	ENST00000592594	KRTAP9-4	Q9BYQ2	154 aa		4.75	□□□□□ -1.65
TMC6-223	ENST00000592594	PMAIP1	Q13794	54 aa		4.74	□□□□□ -1.65
TMC6-223	ENST00000592594	KRTAP6-2	Q3LI66	62 aa		4.67	□□□□□ -1.66
TMC6-223	ENST00000592594	PRAC1	Q96KF2	57 aa		4.65	□□□□□ -1.67
TMC6-223	ENST00000592594	KRTAP4-11	Q9BYQ6	195 aa		4.61	□□□□□ -1.67
TMC6-223	ENST00000592594	PRO0628	Q9UI54	55 aa		4.52	□□□□□ -1.69
TMC6-223	ENST00000592594	AHNAK	Q09666	5890 aa	Known RBP	4.5	□□□□□ -1.69
TMC6-223	ENST00000592594	MUC5AC	P98088	5654 aa		4.48	□□□□□ -1.69
TMC6-223	ENST00000592594	KRTAP5-8	O75690	187 aa		4.47	□□□□□ -1.69
TMC6-223	ENST00000592594	MT3	P25713	68 aa		4.46	□□□□□ -1.7
TMC6-223	ENST00000592594	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.46	□□□□□ -1.7
TMC6-223	ENST00000592594	OBSCN	Q5VST9	7968 aa		4.4	□□□□□ -1.71
TMC6-223	ENST00000592594	KRTAP9-9	Q9BYP9	154 aa		4.34	□□□□□ -1.71
TMC6-223	ENST00000592594	KTN1-AS1	Q86SY8	53 aa		4.31	□□□□□ -1.72
TMC6-223	ENST00000592594	KRTAP5-1	Q6L8H4	278 aa		4.27	□□□□□ -1.73
TMC6-223	ENST00000592594	SVIP	Q8NHG7	77 aa		4.18	□□□□□ -1.74
TMC6-223	ENST00000592594	LCE1E	Q5T753	118 aa		4.08	□□□□□ -1.76
TMC6-223	ENST00000592594	KRTAP4-2	Q9BYR5	136 aa		3.92	□□□□□ -1.78
TMC6-223	ENST00000592594	LCE1B	Q5T7P3	118 aa		3.82	□□□□□ -1.8
TMC6-223	ENST00000592594	LCE1C	Q5T751	118 aa		3.8	□□□□□ -1.8
TMC6-223	ENST00000592594	LCE3D	Q9BYE3	92 aa		3.79	□□□□□ -1.8
TMC6-223	ENST00000592594	LUZP6	Q538Z0	58 aa		3.71	□□□□□ -1.82
TMC6-223	ENST00000592594	LCE3E	Q5T5B0	92 aa		3.59	□□□□□ -1.83
TMC6-223	ENST00000592594	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.51	□□□□□ -1.85
TMC6-223	ENST00000592594	KRTAP5-11	Q6L8G4	156 aa		3.45	□□□□□ -1.86
TMC6-223	ENST00000592594	KRTAP4-12	Q9BQ66	201 aa		3.45	□□□□□ -1.86
TMC6-223	ENST00000592594	KRTAP21-2	Q3LI59	83 aa		3.27	□□□□□ -1.89
TMC6-223	ENST00000592594	LCE1F	Q5T754	118 aa		3.27	□□□□□ -1.89
TMC6-223	ENST00000592594	NDUFAF8	A1L188	74 aa		3.19	□□□□□ -1.9
TMC6-223	ENST00000592594	PHGR1	C9JFL3	82 aa		3.11	□□□□□ -1.91
TMC6-223	ENST00000592594	KRTAP4-4	Q9BYR3	166 aa		2.96	□□□□□ -1.94
TMC6-223	ENST00000592594		H3BS24	57 aa		2.94	□□□□□ -1.94
TMC6-223	ENST00000592594	PRM1	P04553	51 aa		2.83	□□□□□ -1.96
TMC6-223	ENST00000592594	MUC19	Q7Z5P9	8384 aa		2.71	□□□□□ -1.98
TMC6-223	ENST00000592594		A0A0A0MQY5	61 aa		2.7	□□□□□ -1.98
TMC6-223	ENST00000592594	INE1	O15225	51 aa		2.51	□□□□□ -2.01
TMC6-223	ENST00000592594	KRTAP21-1	Q3LI58	79 aa		2.4	□□□□□ -2.03
TMC6-223	ENST00000592594	MUC16	Q8WXI7	14507 aa		1.99	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 120.5 ms