RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
VMP1-214ENST00000592106 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
VMP1-214ENST00000592106 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
VMP1-214ENST00000592106 CYSTM1Q9H1C7 97 aa3.73□□□□□ -1.81
VMP1-214ENST00000592106 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
VMP1-214ENST00000592106 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
VMP1-214ENST00000592106 A0A1B0GU33 70 aa3.7□□□□□ -1.82
VMP1-214ENST00000592106 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
VMP1-214ENST00000592106 MT1GP13640 62 aa3.69□□□□□ -1.82
VMP1-214ENST00000592106 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
VMP1-214ENST00000592106 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
VMP1-214ENST00000592106 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
VMP1-214ENST00000592106 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.82
VMP1-214ENST00000592106 SMIM26A0A096LP01 95 aa3.65□□□□□ -1.83
VMP1-214ENST00000592106 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
VMP1-214ENST00000592106 A0A1B0GU69 56 aa3.62□□□□□ -1.83
VMP1-214ENST00000592106 COX7CP15954 63 aa3.62□□□□□ -1.83
VMP1-214ENST00000592106 MT1MQ8N339 61 aa3.61□□□□□ -1.83
VMP1-214ENST00000592106 TNP1P09430 55 aa3.59□□□□□ -1.83
VMP1-214ENST00000592106 MT1LQ93083 61 aa3.59□□□□□ -1.83
VMP1-214ENST00000592106 MT4P47944 62 aa3.58□□□□□ -1.84
VMP1-214ENST00000592106 H7BZZ5 65 aa3.57□□□□□ -1.84
VMP1-214ENST00000592106 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
VMP1-214ENST00000592106 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
VMP1-214ENST00000592106 A8MU10 97 aa3.54□□□□□ -1.84
VMP1-214ENST00000592106 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
VMP1-214ENST00000592106 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
VMP1-214ENST00000592106 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
VMP1-214ENST00000592106 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
VMP1-214ENST00000592106 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
VMP1-214ENST00000592106 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
VMP1-214ENST00000592106 ANAPC13Q9BS18 74 aa3.43□□□□□ -1.86
VMP1-214ENST00000592106 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
VMP1-214ENST00000592106 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
VMP1-214ENST00000592106 UQCR11O14957 56 aa3.36□□□□□ -1.87
VMP1-214ENST00000592106 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
VMP1-214ENST00000592106 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
VMP1-214ENST00000592106 CCDC179H3BU77 68 aa3.31□□□□□ -1.88
VMP1-214ENST00000592106 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
VMP1-214ENST00000592106 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
VMP1-214ENST00000592106 K7ERS5 55 aa3.29□□□□□ -1.88
VMP1-214ENST00000592106 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
VMP1-214ENST00000592106 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
VMP1-214ENST00000592106 TMEM258P61165 79 aa3.25□□□□□ -1.89
VMP1-214ENST00000592106 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
VMP1-214ENST00000592106 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
VMP1-214ENST00000592106 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
VMP1-214ENST00000592106 V9GYY9 64 aa3.14□□□□□ -1.91
VMP1-214ENST00000592106 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
VMP1-214ENST00000592106 PSPHP1O15172 72 aa3.09□□□□□ -1.91
VMP1-214ENST00000592106 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
VMP1-214ENST00000592106 MT1AP04731 61 aa3.08□□□□□ -1.92
VMP1-214ENST00000592106 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
VMP1-214ENST00000592106 CDC42SE1Q9NRR8 79 aa3.06□□□□□ -1.92
VMP1-214ENST00000592106 Q1T7F1 81 aa3.04□□□□□ -1.92
VMP1-214ENST00000592106 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
VMP1-214ENST00000592106 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
VMP1-214ENST00000592106 A6NED7 52 aa3.02□□□□□ -1.93
VMP1-214ENST00000592106 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
VMP1-214ENST00000592106 KRTAP5-8O75690 187 aa3□□□□□ -1.93
VMP1-214ENST00000592106 ROMO1P60602 79 aa2.97□□□□□ -1.93
VMP1-214ENST00000592106 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
VMP1-214ENST00000592106 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
VMP1-214ENST00000592106 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
VMP1-214ENST00000592106 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
VMP1-214ENST00000592106 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
VMP1-214ENST00000592106 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
VMP1-214ENST00000592106 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
VMP1-214ENST00000592106 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
VMP1-214ENST00000592106 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
VMP1-214ENST00000592106 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
VMP1-214ENST00000592106 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
VMP1-214ENST00000592106 KTN1-AS1Q86SY8 53 aa2.02□□□□□ -2.09
VMP1-214ENST00000592106 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
VMP1-214ENST00000592106 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
VMP1-214ENST00000592106 INE1O15225 51 aa1.53□□□□□ -2.16
VMP1-214ENST00000592106 PRM1P04553 51 aa1.49□□□□□ -2.17
VMP1-214ENST00000592106 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 139 ms