RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
SMARCA4-217ENST00000591595 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
SMARCA4-217ENST00000591595 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
SMARCA4-217ENST00000591595 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
SMARCA4-217ENST00000591595 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
SMARCA4-217ENST00000591595 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
SMARCA4-217ENST00000591595 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
SMARCA4-217ENST00000591595 LOC100996750A0A140TA64 210 aa3.88□□□□□ -1.79
SMARCA4-217ENST00000591595 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
SMARCA4-217ENST00000591595 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
SMARCA4-217ENST00000591595 MT1GP13640 62 aa3.86□□□□□ -1.79
SMARCA4-217ENST00000591595 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SMARCA4-217ENST00000591595 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
SMARCA4-217ENST00000591595 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
SMARCA4-217ENST00000591595 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
SMARCA4-217ENST00000591595 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
SMARCA4-217ENST00000591595 PRM1P04553 51 aa3.78□□□□□ -1.8
SMARCA4-217ENST00000591595 MT1MQ8N339 61 aa3.75□□□□□ -1.81
SMARCA4-217ENST00000591595 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
SMARCA4-217ENST00000591595 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
SMARCA4-217ENST00000591595 KRTAP9-2Q9BYQ4 174 aa3.74□□□□□ -1.81
SMARCA4-217ENST00000591595 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
SMARCA4-217ENST00000591595 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
SMARCA4-217ENST00000591595 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
SMARCA4-217ENST00000591595 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
SMARCA4-217ENST00000591595 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
SMARCA4-217ENST00000591595 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
SMARCA4-217ENST00000591595 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
SMARCA4-217ENST00000591595 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
SMARCA4-217ENST00000591595 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
SMARCA4-217ENST00000591595 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
SMARCA4-217ENST00000591595 MT1AP04731 61 aa3.47□□□□□ -1.85
SMARCA4-217ENST00000591595 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
SMARCA4-217ENST00000591595 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
SMARCA4-217ENST00000591595 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
SMARCA4-217ENST00000591595 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
SMARCA4-217ENST00000591595 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
SMARCA4-217ENST00000591595 SPRR2EP22531 72 aa3.27□□□□□ -1.89
SMARCA4-217ENST00000591595 SPRR2BP35325 72 aa3.27□□□□□ -1.89
SMARCA4-217ENST00000591595 SPRR2AP35326 72 aa3.27□□□□□ -1.89
SMARCA4-217ENST00000591595 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.9
SMARCA4-217ENST00000591595 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
SMARCA4-217ENST00000591595 SPRR2DP22532 72 aa3.12□□□□□ -1.91
SMARCA4-217ENST00000591595 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.91
SMARCA4-217ENST00000591595 MT3P25713 68 aa3.07□□□□□ -1.92
SMARCA4-217ENST00000591595 NEBP20929 6669 aa2.85□□□□□ -1.95
SMARCA4-217ENST00000591595 MT4P47944 62 aa2.81□□□□□ -1.96
SMARCA4-217ENST00000591595 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
SMARCA4-217ENST00000591595 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SMARCA4-217ENST00000591595 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
SMARCA4-217ENST00000591595 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
SMARCA4-217ENST00000591595 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
SMARCA4-217ENST00000591595 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
SMARCA4-217ENST00000591595 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
SMARCA4-217ENST00000591595 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
SMARCA4-217ENST00000591595 MUC5ACP98088 5654 aa2.57□□□□□ -2
SMARCA4-217ENST00000591595 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
SMARCA4-217ENST00000591595 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SMARCA4-217ENST00000591595 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
SMARCA4-217ENST00000591595 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
SMARCA4-217ENST00000591595 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
SMARCA4-217ENST00000591595 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
SMARCA4-217ENST00000591595 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
SMARCA4-217ENST00000591595 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
SMARCA4-217ENST00000591595 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
SMARCA4-217ENST00000591595 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
SMARCA4-217ENST00000591595 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SMARCA4-217ENST00000591595 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
SMARCA4-217ENST00000591595 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
SMARCA4-217ENST00000591595 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.08
SMARCA4-217ENST00000591595 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
SMARCA4-217ENST00000591595 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
SMARCA4-217ENST00000591595 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
SMARCA4-217ENST00000591595 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
SMARCA4-217ENST00000591595 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
SMARCA4-217ENST00000591595 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
SMARCA4-217ENST00000591595 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
SMARCA4-217ENST00000591595 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms