RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
GCDH-216ENST00000591470 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
GCDH-216ENST00000591470 KRTAP9-6A8MVA2 160 aa6.51□□□□□ -1.37
GCDH-216ENST00000591470 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
GCDH-216ENST00000591470 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
GCDH-216ENST00000591470 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
GCDH-216ENST00000591470 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
GCDH-216ENST00000591470 MT1GP13640 62 aa6.29□□□□□ -1.4
GCDH-216ENST00000591470 MT1MQ8N339 61 aa6.27□□□□□ -1.41
GCDH-216ENST00000591470 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
GCDH-216ENST00000591470 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
GCDH-216ENST00000591470 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
GCDH-216ENST00000591470 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
GCDH-216ENST00000591470 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.42
GCDH-216ENST00000591470 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
GCDH-216ENST00000591470 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
GCDH-216ENST00000591470 INE1O15225 51 aa6.16□□□□□ -1.42
GCDH-216ENST00000591470 KRTAP5-9P26371 169 aa6.15□□□□□ -1.43
GCDH-216ENST00000591470 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
GCDH-216ENST00000591470 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
GCDH-216ENST00000591470 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
GCDH-216ENST00000591470 NEBP20929 6669 aa5.92□□□□□ -1.46
GCDH-216ENST00000591470 SPRR2EP22531 72 aa5.9□□□□□ -1.47
GCDH-216ENST00000591470 SPRR2BP35325 72 aa5.9□□□□□ -1.47
GCDH-216ENST00000591470 SPRR2AP35326 72 aa5.9□□□□□ -1.47
GCDH-216ENST00000591470 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
GCDH-216ENST00000591470 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
GCDH-216ENST00000591470 SPRR2DP22532 72 aa5.67□□□□□ -1.5
GCDH-216ENST00000591470 MT1AP04731 61 aa5.62□□□□□ -1.51
GCDH-216ENST00000591470 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
GCDH-216ENST00000591470 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
GCDH-216ENST00000591470 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
GCDH-216ENST00000591470 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
GCDH-216ENST00000591470 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
GCDH-216ENST00000591470 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
GCDH-216ENST00000591470 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
GCDH-216ENST00000591470 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
GCDH-216ENST00000591470 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
GCDH-216ENST00000591470 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
GCDH-216ENST00000591470 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.6
GCDH-216ENST00000591470 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
GCDH-216ENST00000591470 MT3P25713 68 aa5.05□□□□□ -1.6
GCDH-216ENST00000591470 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
GCDH-216ENST00000591470 MT4P47944 62 aa4.98□□□□□ -1.61
GCDH-216ENST00000591470 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
GCDH-216ENST00000591470 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
GCDH-216ENST00000591470 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.63
GCDH-216ENST00000591470 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
GCDH-216ENST00000591470 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
GCDH-216ENST00000591470 PRM1P04553 51 aa4.67□□□□□ -1.66
GCDH-216ENST00000591470 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
GCDH-216ENST00000591470 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
GCDH-216ENST00000591470 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
GCDH-216ENST00000591470 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
GCDH-216ENST00000591470 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
GCDH-216ENST00000591470 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
GCDH-216ENST00000591470 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
GCDH-216ENST00000591470 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
GCDH-216ENST00000591470 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
GCDH-216ENST00000591470 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
GCDH-216ENST00000591470 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
GCDH-216ENST00000591470 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.77
GCDH-216ENST00000591470 LCE1CQ5T751 118 aa4□□□□□ -1.77
GCDH-216ENST00000591470 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
GCDH-216ENST00000591470 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
GCDH-216ENST00000591470 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
GCDH-216ENST00000591470 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
GCDH-216ENST00000591470 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
GCDH-216ENST00000591470 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.85
GCDH-216ENST00000591470 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
GCDH-216ENST00000591470 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
GCDH-216ENST00000591470 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
GCDH-216ENST00000591470 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
GCDH-216ENST00000591470 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
GCDH-216ENST00000591470 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
GCDH-216ENST00000591470 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
GCDH-216ENST00000591470 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 112.9 ms