RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
RETREG3-210ENST00000590541 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
RETREG3-210ENST00000590541 MT1MQ8N339 61 aa6.21□□□□□ -1.42
RETREG3-210ENST00000590541 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
RETREG3-210ENST00000590541 A8MU10 97 aa6.18□□□□□ -1.42
RETREG3-210ENST00000590541 CCDC179H3BU77 68 aa6.18□□□□□ -1.42
RETREG3-210ENST00000590541 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
RETREG3-210ENST00000590541 TNP1P09430 55 aa6.13□□□□□ -1.43
RETREG3-210ENST00000590541 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
RETREG3-210ENST00000590541 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
RETREG3-210ENST00000590541 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
RETREG3-210ENST00000590541 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
RETREG3-210ENST00000590541 MT1LQ93083 61 aa6.09□□□□□ -1.43
RETREG3-210ENST00000590541 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
RETREG3-210ENST00000590541 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
RETREG3-210ENST00000590541 TMEM258P61165 79 aa6.03□□□□□ -1.44
RETREG3-210ENST00000590541 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
RETREG3-210ENST00000590541 UQCR11O14957 56 aa5.99□□□□□ -1.45
RETREG3-210ENST00000590541 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
RETREG3-210ENST00000590541 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
RETREG3-210ENST00000590541 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
RETREG3-210ENST00000590541 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
RETREG3-210ENST00000590541 K7ERS5 55 aa5.79□□□□□ -1.48
RETREG3-210ENST00000590541 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
RETREG3-210ENST00000590541 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
RETREG3-210ENST00000590541 V9GYY9 64 aa5.77□□□□□ -1.49
RETREG3-210ENST00000590541 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
RETREG3-210ENST00000590541 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
RETREG3-210ENST00000590541 Q1T7F1 81 aa5.68□□□□□ -1.5
RETREG3-210ENST00000590541 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
RETREG3-210ENST00000590541 PSPHP1O15172 72 aa5.64□□□□□ -1.51
RETREG3-210ENST00000590541 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
RETREG3-210ENST00000590541 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
RETREG3-210ENST00000590541 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
RETREG3-210ENST00000590541 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
RETREG3-210ENST00000590541 A6NED7 52 aa5.49□□□□□ -1.53
RETREG3-210ENST00000590541 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
RETREG3-210ENST00000590541 MUC5ACP98088 5654 aa5.46□□□□□ -1.54
RETREG3-210ENST00000590541 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
RETREG3-210ENST00000590541 KRTAP5-8O75690 187 aa5.43□□□□□ -1.54
RETREG3-210ENST00000590541 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
RETREG3-210ENST00000590541 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
RETREG3-210ENST00000590541 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
RETREG3-210ENST00000590541 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
RETREG3-210ENST00000590541 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
RETREG3-210ENST00000590541 ROMO1P60602 79 aa5.32□□□□□ -1.56
RETREG3-210ENST00000590541 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
RETREG3-210ENST00000590541 MT1AP04731 61 aa5.16□□□□□ -1.58
RETREG3-210ENST00000590541 PCP4P48539 62 aa5.14□□□□□ -1.59
RETREG3-210ENST00000590541 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
RETREG3-210ENST00000590541 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
RETREG3-210ENST00000590541 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
RETREG3-210ENST00000590541 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
RETREG3-210ENST00000590541 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
RETREG3-210ENST00000590541 MT3P25713 68 aa4.74□□□□□ -1.65
RETREG3-210ENST00000590541 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
RETREG3-210ENST00000590541 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
RETREG3-210ENST00000590541 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
RETREG3-210ENST00000590541 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
RETREG3-210ENST00000590541 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
RETREG3-210ENST00000590541 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
RETREG3-210ENST00000590541 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
RETREG3-210ENST00000590541 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
RETREG3-210ENST00000590541 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
RETREG3-210ENST00000590541 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
RETREG3-210ENST00000590541 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
RETREG3-210ENST00000590541 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
RETREG3-210ENST00000590541 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
RETREG3-210ENST00000590541 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
RETREG3-210ENST00000590541 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
RETREG3-210ENST00000590541 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
RETREG3-210ENST00000590541 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
RETREG3-210ENST00000590541 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
RETREG3-210ENST00000590541 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
RETREG3-210ENST00000590541 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
RETREG3-210ENST00000590541 PRM1P04553 51 aa2.68□□□□□ -1.98
RETREG3-210ENST00000590541 INE1O15225 51 aa2.27□□□□□ -2.05
RETREG3-210ENST00000590541 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 62.5 ms