RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
ZNF554-203ENST00000590116 KRTAP19-6Q3LI70 58 aa7.04□□□□□ -1.28
ZNF554-203ENST00000590116 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
ZNF554-203ENST00000590116 KRTAP4-3Q9BYR4 195 aa6.95□□□□□ -1.3
ZNF554-203ENST00000590116 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
ZNF554-203ENST00000590116 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
ZNF554-203ENST00000590116 MT1GP13640 62 aa6.81□□□□□ -1.32
ZNF554-203ENST00000590116 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
ZNF554-203ENST00000590116 MT1MQ8N339 61 aa6.74□□□□□ -1.33
ZNF554-203ENST00000590116 KRTAP19-3Q7Z4W3 81 aa6.73□□□□□ -1.33
ZNF554-203ENST00000590116 DSTQ03001 7570 aaKnown RBP6.72□□□□□ -1.33
ZNF554-203ENST00000590116 MACF1Q9UPN3 7388 aaKnown RBP6.55□□□□□ -1.36
ZNF554-203ENST00000590116 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
ZNF554-203ENST00000590116 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
ZNF554-203ENST00000590116 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
ZNF554-203ENST00000590116 MDN1Q9NU22 5596 aa6.34□□□□□ -1.39
ZNF554-203ENST00000590116 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
ZNF554-203ENST00000590116 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
ZNF554-203ENST00000590116 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
ZNF554-203ENST00000590116 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
ZNF554-203ENST00000590116 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
ZNF554-203ENST00000590116 MT1AP04731 61 aa6.04□□□□□ -1.44
ZNF554-203ENST00000590116 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
ZNF554-203ENST00000590116 KRTAP5-9P26371 169 aa5.96□□□□□ -1.46
ZNF554-203ENST00000590116 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
ZNF554-203ENST00000590116 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
ZNF554-203ENST00000590116 SPRR2EP22531 72 aa5.9□□□□□ -1.46
ZNF554-203ENST00000590116 SPRR2BP35325 72 aa5.9□□□□□ -1.46
ZNF554-203ENST00000590116 SPRR2AP35326 72 aa5.9□□□□□ -1.46
ZNF554-203ENST00000590116 LCE3DQ9BYE3 92 aa5.9□□□□□ -1.47
ZNF554-203ENST00000590116 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
ZNF554-203ENST00000590116 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
ZNF554-203ENST00000590116 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
ZNF554-203ENST00000590116 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
ZNF554-203ENST00000590116 SPRR2DP22532 72 aa5.63□□□□□ -1.51
ZNF554-203ENST00000590116 PRM1P04553 51 aa5.62□□□□□ -1.51
ZNF554-203ENST00000590116 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
ZNF554-203ENST00000590116 MT3P25713 68 aa5.42□□□□□ -1.54
ZNF554-203ENST00000590116 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
ZNF554-203ENST00000590116 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
ZNF554-203ENST00000590116 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
ZNF554-203ENST00000590116 NEBP20929 6669 aa5.15□□□□□ -1.58
ZNF554-203ENST00000590116 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
ZNF554-203ENST00000590116 MT4P47944 62 aa5.05□□□□□ -1.6
ZNF554-203ENST00000590116 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
ZNF554-203ENST00000590116 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
ZNF554-203ENST00000590116 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
ZNF554-203ENST00000590116 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
ZNF554-203ENST00000590116 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
ZNF554-203ENST00000590116 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
ZNF554-203ENST00000590116 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
ZNF554-203ENST00000590116 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
ZNF554-203ENST00000590116 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
ZNF554-203ENST00000590116 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
ZNF554-203ENST00000590116 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
ZNF554-203ENST00000590116 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
ZNF554-203ENST00000590116 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
ZNF554-203ENST00000590116 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
ZNF554-203ENST00000590116 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
ZNF554-203ENST00000590116 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
ZNF554-203ENST00000590116 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
ZNF554-203ENST00000590116 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
ZNF554-203ENST00000590116 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
ZNF554-203ENST00000590116 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
ZNF554-203ENST00000590116 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
ZNF554-203ENST00000590116 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
ZNF554-203ENST00000590116 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
ZNF554-203ENST00000590116 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
ZNF554-203ENST00000590116 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
ZNF554-203ENST00000590116 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
ZNF554-203ENST00000590116 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
ZNF554-203ENST00000590116 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
ZNF554-203ENST00000590116 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
ZNF554-203ENST00000590116 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
ZNF554-203ENST00000590116 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
ZNF554-203ENST00000590116 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
ZNF554-203ENST00000590116 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
ZNF554-203ENST00000590116 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms