RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MT1LQ93083 61 aa4.94□□□□□ -1.62
RETREG3-208ENST00000589797 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
RETREG3-208ENST00000589797 MT1EP04732 61 aa4.93□□□□□ -1.62
RETREG3-208ENST00000589797 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
RETREG3-208ENST00000589797 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
RETREG3-208ENST00000589797 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
RETREG3-208ENST00000589797 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
RETREG3-208ENST00000589797 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
RETREG3-208ENST00000589797 SPRR2EP22531 72 aa4.85□□□□□ -1.63
RETREG3-208ENST00000589797 SPRR2BP35325 72 aa4.85□□□□□ -1.63
RETREG3-208ENST00000589797 SPRR2AP35326 72 aa4.85□□□□□ -1.63
RETREG3-208ENST00000589797 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
RETREG3-208ENST00000589797 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
RETREG3-208ENST00000589797 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
RETREG3-208ENST00000589797 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
RETREG3-208ENST00000589797 MT1MQ8N339 61 aa4.71□□□□□ -1.66
RETREG3-208ENST00000589797 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
RETREG3-208ENST00000589797 KRTAP12-4P60329 112 aa4.65□□□□□ -1.66
RETREG3-208ENST00000589797 SPRR2DP22532 72 aa4.63□□□□□ -1.67
RETREG3-208ENST00000589797 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
RETREG3-208ENST00000589797 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
RETREG3-208ENST00000589797 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.7
RETREG3-208ENST00000589797 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
RETREG3-208ENST00000589797 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
RETREG3-208ENST00000589797 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
RETREG3-208ENST00000589797 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
RETREG3-208ENST00000589797 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
RETREG3-208ENST00000589797 MT4P47944 62 aa4.31□□□□□ -1.72
RETREG3-208ENST00000589797 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
RETREG3-208ENST00000589797 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
RETREG3-208ENST00000589797 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
RETREG3-208ENST00000589797 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
RETREG3-208ENST00000589797 MT1AP04731 61 aa4.18□□□□□ -1.74
RETREG3-208ENST00000589797 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
RETREG3-208ENST00000589797 MT3P25713 68 aa4.1□□□□□ -1.75
RETREG3-208ENST00000589797 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.76
RETREG3-208ENST00000589797 PRM1P04553 51 aa4.05□□□□□ -1.76
RETREG3-208ENST00000589797 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
RETREG3-208ENST00000589797 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
RETREG3-208ENST00000589797 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
RETREG3-208ENST00000589797 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
RETREG3-208ENST00000589797 KRTAP5-9P26371 169 aa3.9□□□□□ -1.78
RETREG3-208ENST00000589797 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.78
RETREG3-208ENST00000589797 NEBP20929 6669 aa3.81□□□□□ -1.8
RETREG3-208ENST00000589797 KRTAP4-6Q9BYQ5 205 aa3.76□□□□□ -1.81
RETREG3-208ENST00000589797 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
RETREG3-208ENST00000589797 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
RETREG3-208ENST00000589797 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
RETREG3-208ENST00000589797 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
RETREG3-208ENST00000589797 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
RETREG3-208ENST00000589797 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
RETREG3-208ENST00000589797 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
RETREG3-208ENST00000589797 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
RETREG3-208ENST00000589797 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
RETREG3-208ENST00000589797 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
RETREG3-208ENST00000589797 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
RETREG3-208ENST00000589797 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
RETREG3-208ENST00000589797 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
RETREG3-208ENST00000589797 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
RETREG3-208ENST00000589797 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
RETREG3-208ENST00000589797 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
RETREG3-208ENST00000589797 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
RETREG3-208ENST00000589797 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
RETREG3-208ENST00000589797 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
RETREG3-208ENST00000589797 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
RETREG3-208ENST00000589797 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
RETREG3-208ENST00000589797 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
RETREG3-208ENST00000589797 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
RETREG3-208ENST00000589797 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
RETREG3-208ENST00000589797 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
RETREG3-208ENST00000589797 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
RETREG3-208ENST00000589797 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
RETREG3-208ENST00000589797 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
RETREG3-208ENST00000589797 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
RETREG3-208ENST00000589797 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
RETREG3-208ENST00000589797 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
RETREG3-208ENST00000589797 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
RETREG3-208ENST00000589797 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms