RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
H3F3B-207ENST00000589417 DSTQ03001 7570 aaKnown RBP6.25□□□□□ -1.41
H3F3B-207ENST00000589417 K7ERS5 55 aa6.24□□□□□ -1.41
H3F3B-207ENST00000589417 RPS28P62857 69 aaKnown RBP6.24□□□□□ -1.41
H3F3B-207ENST00000589417 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
H3F3B-207ENST00000589417 MT1MQ8N339 61 aa6.2□□□□□ -1.42
H3F3B-207ENST00000589417 PCP4P48539 62 aa6.18□□□□□ -1.42
H3F3B-207ENST00000589417 KRTAP12-3P60328 96 aa6.15□□□□□ -1.42
H3F3B-207ENST00000589417 A6NED7 52 aa6.11□□□□□ -1.43
H3F3B-207ENST00000589417 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
H3F3B-207ENST00000589417 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
H3F3B-207ENST00000589417 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
H3F3B-207ENST00000589417 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
H3F3B-207ENST00000589417 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
H3F3B-207ENST00000589417 CDC42SE1Q9NRR8 79 aa5.93□□□□□ -1.46
H3F3B-207ENST00000589417 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
H3F3B-207ENST00000589417 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
H3F3B-207ENST00000589417 ROMO1P60602 79 aa5.86□□□□□ -1.47
H3F3B-207ENST00000589417 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
H3F3B-207ENST00000589417 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
H3F3B-207ENST00000589417 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
H3F3B-207ENST00000589417 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
H3F3B-207ENST00000589417 MT4P47944 62 aa5.75□□□□□ -1.49
H3F3B-207ENST00000589417 KRTAP5-5Q701N2 237 aaPredicted RBP5.72□□□□□ -1.49
H3F3B-207ENST00000589417 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
H3F3B-207ENST00000589417 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
H3F3B-207ENST00000589417 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
H3F3B-207ENST00000589417 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
H3F3B-207ENST00000589417 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
H3F3B-207ENST00000589417 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
H3F3B-207ENST00000589417 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
H3F3B-207ENST00000589417 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
H3F3B-207ENST00000589417 KRTAP5-10Q6L8G5 202 aa5.39□□□□□ -1.55
H3F3B-207ENST00000589417 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
H3F3B-207ENST00000589417 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
H3F3B-207ENST00000589417 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
H3F3B-207ENST00000589417 MT1AP04731 61 aa5.35□□□□□ -1.55
H3F3B-207ENST00000589417 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
H3F3B-207ENST00000589417 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
H3F3B-207ENST00000589417 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
H3F3B-207ENST00000589417 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
H3F3B-207ENST00000589417 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
H3F3B-207ENST00000589417 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
H3F3B-207ENST00000589417 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
H3F3B-207ENST00000589417 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
H3F3B-207ENST00000589417 MT3P25713 68 aa4.89□□□□□ -1.63
H3F3B-207ENST00000589417 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
H3F3B-207ENST00000589417 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
H3F3B-207ENST00000589417 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
H3F3B-207ENST00000589417 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
H3F3B-207ENST00000589417 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
H3F3B-207ENST00000589417 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
H3F3B-207ENST00000589417 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
H3F3B-207ENST00000589417 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
H3F3B-207ENST00000589417 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
H3F3B-207ENST00000589417 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
H3F3B-207ENST00000589417 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
H3F3B-207ENST00000589417 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
H3F3B-207ENST00000589417 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
H3F3B-207ENST00000589417 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
H3F3B-207ENST00000589417 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
H3F3B-207ENST00000589417 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
H3F3B-207ENST00000589417 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
H3F3B-207ENST00000589417 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
H3F3B-207ENST00000589417 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
H3F3B-207ENST00000589417 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
H3F3B-207ENST00000589417 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
H3F3B-207ENST00000589417 H3BS24 57 aa3.62□□□□□ -1.83
H3F3B-207ENST00000589417 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
H3F3B-207ENST00000589417 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
H3F3B-207ENST00000589417 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
H3F3B-207ENST00000589417 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
H3F3B-207ENST00000589417 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
H3F3B-207ENST00000589417 PRM1P04553 51 aa2.97□□□□□ -1.93
H3F3B-207ENST00000589417 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
H3F3B-207ENST00000589417 INE1O15225 51 aa2.77□□□□□ -1.97
H3F3B-207ENST00000589417 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
H3F3B-207ENST00000589417 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms