RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 TMEM258P61165 79 aa6.76□□□□□ -1.33
CCDC130-209ENST00000588809 GPR98Q8WXG9 6306 aa6.73□□□□□ -1.33
CCDC130-209ENST00000588809 LCE1DQ5T752 114 aa6.69□□□□□ -1.34
CCDC130-209ENST00000588809 LCE4AQ5TA78 99 aa6.68□□□□□ -1.34
CCDC130-209ENST00000588809 HMCN1Q96RW7 5635 aa6.67□□□□□ -1.34
CCDC130-209ENST00000588809 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.34
CCDC130-209ENST00000588809 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
CCDC130-209ENST00000588809 UQCR11O14957 56 aa6.62□□□□□ -1.35
CCDC130-209ENST00000588809 KRTAP5-4Q6L8H1 288 aa6.58□□□□□ -1.36
CCDC130-209ENST00000588809 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
CCDC130-209ENST00000588809 MT4P47944 62 aa6.56□□□□□ -1.36
CCDC130-209ENST00000588809 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
CCDC130-209ENST00000588809 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
CCDC130-209ENST00000588809 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
CCDC130-209ENST00000588809 AHNAK2Q8IVF2 5795 aa6.42□□□□□ -1.38
CCDC130-209ENST00000588809 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
CCDC130-209ENST00000588809 K7ERS5 55 aa6.32□□□□□ -1.4
CCDC130-209ENST00000588809 V9GYY9 64 aa6.32□□□□□ -1.4
CCDC130-209ENST00000588809 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
CCDC130-209ENST00000588809 Q1T7F1 81 aa6.28□□□□□ -1.4
CCDC130-209ENST00000588809 PSPHP1O15172 72 aa6.27□□□□□ -1.41
CCDC130-209ENST00000588809 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
CCDC130-209ENST00000588809 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
CCDC130-209ENST00000588809 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
CCDC130-209ENST00000588809 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
CCDC130-209ENST00000588809 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
CCDC130-209ENST00000588809 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
CCDC130-209ENST00000588809 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
CCDC130-209ENST00000588809 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
CCDC130-209ENST00000588809 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
CCDC130-209ENST00000588809 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
CCDC130-209ENST00000588809 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
CCDC130-209ENST00000588809 A6NED7 52 aa6.05□□□□□ -1.44
CCDC130-209ENST00000588809 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
CCDC130-209ENST00000588809 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
CCDC130-209ENST00000588809 KRTAP5-7Q6L8G8 165 aa6.03□□□□□ -1.44
CCDC130-209ENST00000588809 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
CCDC130-209ENST00000588809 ROMO1P60602 79 aa5.9□□□□□ -1.46
CCDC130-209ENST00000588809 MT1AP04731 61 aa5.81□□□□□ -1.48
CCDC130-209ENST00000588809 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
CCDC130-209ENST00000588809 KRTAP5-2Q701N4 177 aa5.76□□□□□ -1.49
CCDC130-209ENST00000588809 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
CCDC130-209ENST00000588809 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
CCDC130-209ENST00000588809 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
CCDC130-209ENST00000588809 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
CCDC130-209ENST00000588809 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
CCDC130-209ENST00000588809 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
CCDC130-209ENST00000588809 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
CCDC130-209ENST00000588809 KRTAP5-8O75690 187 aa5.48□□□□□ -1.53
CCDC130-209ENST00000588809 MT3P25713 68 aa5.31□□□□□ -1.56
CCDC130-209ENST00000588809 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
CCDC130-209ENST00000588809 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
CCDC130-209ENST00000588809 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
CCDC130-209ENST00000588809 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
CCDC130-209ENST00000588809 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
CCDC130-209ENST00000588809 KRTAP5-1Q6L8H4 278 aa5.17□□□□□ -1.58
CCDC130-209ENST00000588809 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
CCDC130-209ENST00000588809 H3BS24 57 aa4.91□□□□□ -1.62
CCDC130-209ENST00000588809 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
CCDC130-209ENST00000588809 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
CCDC130-209ENST00000588809 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
CCDC130-209ENST00000588809 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
CCDC130-209ENST00000588809 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
CCDC130-209ENST00000588809 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
CCDC130-209ENST00000588809 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
CCDC130-209ENST00000588809 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
CCDC130-209ENST00000588809 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
CCDC130-209ENST00000588809 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
CCDC130-209ENST00000588809 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
CCDC130-209ENST00000588809 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
CCDC130-209ENST00000588809 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
CCDC130-209ENST00000588809 INE1O15225 51 aa3.81□□□□□ -1.8
CCDC130-209ENST00000588809 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
CCDC130-209ENST00000588809 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
CCDC130-209ENST00000588809 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
CCDC130-209ENST00000588809 PRM1P04553 51 aa3□□□□□ -1.93
CCDC130-209ENST00000588809 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
CCDC130-209ENST00000588809 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 155.2 ms