RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 MT1LQ93083 61 aa5.17□□□□□ -1.58
CACTIN-206ENST00000588749 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.59
CACTIN-206ENST00000588749 MT1MQ8N339 61 aa5.14□□□□□ -1.59
CACTIN-206ENST00000588749 PSPHP1O15172 72 aa5.1□□□□□ -1.59
CACTIN-206ENST00000588749 Q1T7F1 81 aa5.09□□□□□ -1.59
CACTIN-206ENST00000588749 V9GYY9 64 aa5.09□□□□□ -1.59
CACTIN-206ENST00000588749 K7ERS5 55 aa5.05□□□□□ -1.6
CACTIN-206ENST00000588749 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
CACTIN-206ENST00000588749 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
CACTIN-206ENST00000588749 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
CACTIN-206ENST00000588749 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
CACTIN-206ENST00000588749 A6NED7 52 aa4.93□□□□□ -1.62
CACTIN-206ENST00000588749 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
CACTIN-206ENST00000588749 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
CACTIN-206ENST00000588749 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
CACTIN-206ENST00000588749 MT4P47944 62 aa4.9□□□□□ -1.63
CACTIN-206ENST00000588749 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
CACTIN-206ENST00000588749 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
CACTIN-206ENST00000588749 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
CACTIN-206ENST00000588749 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
CACTIN-206ENST00000588749 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
CACTIN-206ENST00000588749 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
CACTIN-206ENST00000588749 ROMO1P60602 79 aa4.71□□□□□ -1.66
CACTIN-206ENST00000588749 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
CACTIN-206ENST00000588749 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
CACTIN-206ENST00000588749 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
CACTIN-206ENST00000588749 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
CACTIN-206ENST00000588749 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
CACTIN-206ENST00000588749 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
CACTIN-206ENST00000588749 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
CACTIN-206ENST00000588749 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
CACTIN-206ENST00000588749 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
CACTIN-206ENST00000588749 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
CACTIN-206ENST00000588749 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
CACTIN-206ENST00000588749 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
CACTIN-206ENST00000588749 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
CACTIN-206ENST00000588749 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
CACTIN-206ENST00000588749 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
CACTIN-206ENST00000588749 MT1AP04731 61 aa4.39□□□□□ -1.71
CACTIN-206ENST00000588749 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
CACTIN-206ENST00000588749 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
CACTIN-206ENST00000588749 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
CACTIN-206ENST00000588749 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
CACTIN-206ENST00000588749 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
CACTIN-206ENST00000588749 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
CACTIN-206ENST00000588749 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
CACTIN-206ENST00000588749 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
CACTIN-206ENST00000588749 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
CACTIN-206ENST00000588749 MT3P25713 68 aa4.01□□□□□ -1.77
CACTIN-206ENST00000588749 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
CACTIN-206ENST00000588749 SVIPQ8NHG7 77 aa3.96□□□□□ -1.78
CACTIN-206ENST00000588749 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
CACTIN-206ENST00000588749 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
CACTIN-206ENST00000588749 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
CACTIN-206ENST00000588749 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
CACTIN-206ENST00000588749 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
CACTIN-206ENST00000588749 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
CACTIN-206ENST00000588749 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
CACTIN-206ENST00000588749 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CACTIN-206ENST00000588749 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
CACTIN-206ENST00000588749 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
CACTIN-206ENST00000588749 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
CACTIN-206ENST00000588749 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CACTIN-206ENST00000588749 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
CACTIN-206ENST00000588749 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
CACTIN-206ENST00000588749 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
CACTIN-206ENST00000588749 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
CACTIN-206ENST00000588749 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
CACTIN-206ENST00000588749 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
CACTIN-206ENST00000588749 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
CACTIN-206ENST00000588749 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
CACTIN-206ENST00000588749 INE1O15225 51 aa2.73□□□□□ -1.97
CACTIN-206ENST00000588749 H3BS24 57 aa2.67□□□□□ -1.98
CACTIN-206ENST00000588749 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
CACTIN-206ENST00000588749 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
CACTIN-206ENST00000588749 PRM1P04553 51 aa2.42□□□□□ -2.02
CACTIN-206ENST00000588749 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CACTIN-206ENST00000588749 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms