RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 V9GYY9 64 aa3.68□□□□□ -1.82
TPM4-209ENST00000588483 Q1T7F1 81 aa3.67□□□□□ -1.82
TPM4-209ENST00000588483 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
TPM4-209ENST00000588483 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
TPM4-209ENST00000588483 PSPHP1O15172 72 aa3.61□□□□□ -1.83
TPM4-209ENST00000588483 K7ERS5 55 aa3.6□□□□□ -1.83
TPM4-209ENST00000588483 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
TPM4-209ENST00000588483 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.83
TPM4-209ENST00000588483 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
TPM4-209ENST00000588483 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
TPM4-209ENST00000588483 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
TPM4-209ENST00000588483 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
TPM4-209ENST00000588483 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
TPM4-209ENST00000588483 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
TPM4-209ENST00000588483 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
TPM4-209ENST00000588483 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
TPM4-209ENST00000588483 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
TPM4-209ENST00000588483 A6NED7 52 aa3.49□□□□□ -1.85
TPM4-209ENST00000588483 MT4P47944 62 aa3.48□□□□□ -1.85
TPM4-209ENST00000588483 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
TPM4-209ENST00000588483 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
TPM4-209ENST00000588483 PCP4P48539 62 aa3.42□□□□□ -1.86
TPM4-209ENST00000588483 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
TPM4-209ENST00000588483 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
TPM4-209ENST00000588483 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
TPM4-209ENST00000588483 ROMO1P60602 79 aa3.38□□□□□ -1.87
TPM4-209ENST00000588483 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
TPM4-209ENST00000588483 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.87
TPM4-209ENST00000588483 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
TPM4-209ENST00000588483 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
TPM4-209ENST00000588483 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
TPM4-209ENST00000588483 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
TPM4-209ENST00000588483 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
TPM4-209ENST00000588483 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
TPM4-209ENST00000588483 MT1AP04731 61 aa3.2□□□□□ -1.9
TPM4-209ENST00000588483 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
TPM4-209ENST00000588483 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
TPM4-209ENST00000588483 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
TPM4-209ENST00000588483 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
TPM4-209ENST00000588483 KRTAP9-4Q9BYQ2 154 aa3.08□□□□□ -1.92
TPM4-209ENST00000588483 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
TPM4-209ENST00000588483 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
TPM4-209ENST00000588483 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
TPM4-209ENST00000588483 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
TPM4-209ENST00000588483 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
TPM4-209ENST00000588483 MT3P25713 68 aa2.91□□□□□ -1.94
TPM4-209ENST00000588483 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
TPM4-209ENST00000588483 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
TPM4-209ENST00000588483 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
TPM4-209ENST00000588483 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
TPM4-209ENST00000588483 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
TPM4-209ENST00000588483 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
TPM4-209ENST00000588483 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
TPM4-209ENST00000588483 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
TPM4-209ENST00000588483 PRO0628Q9UI54 55 aa2.66□□□□□ -1.98
TPM4-209ENST00000588483 KTN1-AS1Q86SY8 53 aa2.55□□□□□ -2
TPM4-209ENST00000588483 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
TPM4-209ENST00000588483 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
TPM4-209ENST00000588483 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
TPM4-209ENST00000588483 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
TPM4-209ENST00000588483 SVIPQ8NHG7 77 aa2.37□□□□□ -2.03
TPM4-209ENST00000588483 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
TPM4-209ENST00000588483 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
TPM4-209ENST00000588483 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
TPM4-209ENST00000588483 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
TPM4-209ENST00000588483 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
TPM4-209ENST00000588483 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
TPM4-209ENST00000588483 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
TPM4-209ENST00000588483 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
TPM4-209ENST00000588483 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
TPM4-209ENST00000588483 NDUFAF8A1L188 74 aa1.83□□□□□ -2.12
TPM4-209ENST00000588483 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
TPM4-209ENST00000588483 PRM1P04553 51 aa1.71□□□□□ -2.14
TPM4-209ENST00000588483 A0A0A0MQY5 61 aa1.51□□□□□ -2.17
TPM4-209ENST00000588483 INE1O15225 51 aa1.51□□□□□ -2.17
TPM4-209ENST00000588483 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
TPM4-209ENST00000588483 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
TPM4-209ENST00000588483 H3BS24 57 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 70.4 ms