RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 UQCR11O14957 56 aa7.65□□□□□ -1.18
CIRBP-219ENST00000588411 LCE4AQ5TA78 99 aa7.59□□□□□ -1.19
CIRBP-219ENST00000588411 LCE1DQ5T752 114 aa7.57□□□□□ -1.2
CIRBP-219ENST00000588411 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
CIRBP-219ENST00000588411 KRTAP4-3Q9BYR4 195 aa7.5□□□□□ -1.21
CIRBP-219ENST00000588411 MT4P47944 62 aa7.49□□□□□ -1.21
CIRBP-219ENST00000588411 HMCN1Q96RW7 5635 aa7.48□□□□□ -1.21
CIRBP-219ENST00000588411 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.22
CIRBP-219ENST00000588411 K7ERS5 55 aa7.42□□□□□ -1.22
CIRBP-219ENST00000588411 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
CIRBP-219ENST00000588411 KRTAP5-4Q6L8H1 288 aa7.39□□□□□ -1.23
CIRBP-219ENST00000588411 V9GYY9 64 aa7.34□□□□□ -1.23
CIRBP-219ENST00000588411 KRTAP4-7Q9BYR0 210 aa7.32□□□□□ -1.24
CIRBP-219ENST00000588411 AHNAK2Q8IVF2 5795 aa7.26□□□□□ -1.25
CIRBP-219ENST00000588411 PSPHP1O15172 72 aa7.25□□□□□ -1.25
CIRBP-219ENST00000588411 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
CIRBP-219ENST00000588411 Q1T7F1 81 aa7.21□□□□□ -1.26
CIRBP-219ENST00000588411 KRTAP19-4Q3LI73 84 aa7.14□□□□□ -1.27
CIRBP-219ENST00000588411 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
CIRBP-219ENST00000588411 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
CIRBP-219ENST00000588411 A6NED7 52 aa7.05□□□□□ -1.28
CIRBP-219ENST00000588411 KRTAP5-10Q6L8G5 202 aa7.05□□□□□ -1.28
CIRBP-219ENST00000588411 KRTAP12-4P60329 112 aa7□□□□□ -1.29
CIRBP-219ENST00000588411 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
CIRBP-219ENST00000588411 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
CIRBP-219ENST00000588411 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
CIRBP-219ENST00000588411 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
CIRBP-219ENST00000588411 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
CIRBP-219ENST00000588411 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
CIRBP-219ENST00000588411 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
CIRBP-219ENST00000588411 ROMO1P60602 79 aa6.82□□□□□ -1.32
CIRBP-219ENST00000588411 KRTAP5-7Q6L8G8 165 aa6.8□□□□□ -1.32
CIRBP-219ENST00000588411 SYNE1Q8NF91 8797 aaKnown RBP6.79□□□□□ -1.32
CIRBP-219ENST00000588411 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
CIRBP-219ENST00000588411 MT1AP04731 61 aa6.62□□□□□ -1.35
CIRBP-219ENST00000588411 KRTAP6-1Q3LI64 71 aa6.54□□□□□ -1.36
CIRBP-219ENST00000588411 PCP4P48539 62 aa6.52□□□□□ -1.37
CIRBP-219ENST00000588411 KRTAP5-2Q701N4 177 aa6.47□□□□□ -1.37
CIRBP-219ENST00000588411 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
CIRBP-219ENST00000588411 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
CIRBP-219ENST00000588411 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
CIRBP-219ENST00000588411 KRTAP6-2Q3LI66 62 aa6.28□□□□□ -1.4
CIRBP-219ENST00000588411 KRTAP5-8O75690 187 aa6.16□□□□□ -1.42
CIRBP-219ENST00000588411 MT3P25713 68 aa6.08□□□□□ -1.44
CIRBP-219ENST00000588411 AHNAKQ09666 5890 aaKnown RBP6.01□□□□□ -1.45
CIRBP-219ENST00000588411 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
CIRBP-219ENST00000588411 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
CIRBP-219ENST00000588411 MUC5ACP98088 5654 aa5.94□□□□□ -1.46
CIRBP-219ENST00000588411 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
CIRBP-219ENST00000588411 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
CIRBP-219ENST00000588411 KRTAP5-1Q6L8H4 278 aa5.79□□□□□ -1.48
CIRBP-219ENST00000588411 LCE1EQ5T753 118 aa5.59□□□□□ -1.51
CIRBP-219ENST00000588411 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
CIRBP-219ENST00000588411 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
CIRBP-219ENST00000588411 LCE1BQ5T7P3 118 aa5.26□□□□□ -1.57
CIRBP-219ENST00000588411 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
CIRBP-219ENST00000588411 LCE1CQ5T751 118 aa5.17□□□□□ -1.58
CIRBP-219ENST00000588411 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
CIRBP-219ENST00000588411 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
CIRBP-219ENST00000588411 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
CIRBP-219ENST00000588411 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
CIRBP-219ENST00000588411 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
CIRBP-219ENST00000588411 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
CIRBP-219ENST00000588411 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
CIRBP-219ENST00000588411 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
CIRBP-219ENST00000588411 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
CIRBP-219ENST00000588411 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
CIRBP-219ENST00000588411 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
CIRBP-219ENST00000588411 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
CIRBP-219ENST00000588411 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
CIRBP-219ENST00000588411 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
CIRBP-219ENST00000588411 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
CIRBP-219ENST00000588411 PRM1P04553 51 aa3.46□□□□□ -1.86
CIRBP-219ENST00000588411 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
CIRBP-219ENST00000588411 INE1O15225 51 aa2.83□□□□□ -1.96
CIRBP-219ENST00000588411 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
CIRBP-219ENST00000588411 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
CIRBP-219ENST00000588411 H3BS24 57 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 16.1 ms