RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
TPM4-208ENST00000588410 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
TPM4-208ENST00000588410 KRTAP12-3P60328 96 aa6.76□□□□□ -1.33
TPM4-208ENST00000588410 KRTAP4-3Q9BYR4 195 aa6.76□□□□□ -1.33
TPM4-208ENST00000588410 K7ERS5 55 aa6.75□□□□□ -1.33
TPM4-208ENST00000588410 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
TPM4-208ENST00000588410 V9GYY9 64 aa6.73□□□□□ -1.33
TPM4-208ENST00000588410 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
TPM4-208ENST00000588410 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
TPM4-208ENST00000588410 PSPHP1O15172 72 aa6.69□□□□□ -1.34
TPM4-208ENST00000588410 MT4P47944 62 aa6.68□□□□□ -1.34
TPM4-208ENST00000588410 Q1T7F1 81 aa6.63□□□□□ -1.35
TPM4-208ENST00000588410 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
TPM4-208ENST00000588410 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
TPM4-208ENST00000588410 KRTAP5-4Q6L8H1 288 aa6.57□□□□□ -1.36
TPM4-208ENST00000588410 AHNAK2Q8IVF2 5795 aa6.48□□□□□ -1.37
TPM4-208ENST00000588410 A6NED7 52 aa6.48□□□□□ -1.37
TPM4-208ENST00000588410 KRTAP5-10Q6L8G5 202 aa6.46□□□□□ -1.38
TPM4-208ENST00000588410 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
TPM4-208ENST00000588410 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
TPM4-208ENST00000588410 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
TPM4-208ENST00000588410 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
TPM4-208ENST00000588410 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
TPM4-208ENST00000588410 KRTAP5-5Q701N2 237 aaPredicted RBP6.32□□□□□ -1.4
TPM4-208ENST00000588410 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
TPM4-208ENST00000588410 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
TPM4-208ENST00000588410 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
TPM4-208ENST00000588410 ROMO1P60602 79 aa6.24□□□□□ -1.41
TPM4-208ENST00000588410 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
TPM4-208ENST00000588410 KRTAP20-2Q3LI61 65 aa6.23□□□□□ -1.41
TPM4-208ENST00000588410 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
TPM4-208ENST00000588410 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
TPM4-208ENST00000588410 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
TPM4-208ENST00000588410 PCP4P48539 62 aa6.15□□□□□ -1.42
TPM4-208ENST00000588410 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
TPM4-208ENST00000588410 MT1AP04731 61 aa5.93□□□□□ -1.46
TPM4-208ENST00000588410 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
TPM4-208ENST00000588410 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
TPM4-208ENST00000588410 KRTAP5-2Q701N4 177 aa5.76□□□□□ -1.49
TPM4-208ENST00000588410 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
TPM4-208ENST00000588410 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
TPM4-208ENST00000588410 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
TPM4-208ENST00000588410 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
TPM4-208ENST00000588410 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
TPM4-208ENST00000588410 KRTAP5-8O75690 187 aa5.48□□□□□ -1.53
TPM4-208ENST00000588410 MUC5BQ9HC84 5762 aaPredicted RBP5.48□□□□□ -1.53
TPM4-208ENST00000588410 MUC5ACP98088 5654 aa5.46□□□□□ -1.54
TPM4-208ENST00000588410 MT3P25713 68 aa5.45□□□□□ -1.54
TPM4-208ENST00000588410 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
TPM4-208ENST00000588410 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
TPM4-208ENST00000588410 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
TPM4-208ENST00000588410 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
TPM4-208ENST00000588410 PRAC1Q96KF2 57 aa5□□□□□ -1.61
TPM4-208ENST00000588410 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
TPM4-208ENST00000588410 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
TPM4-208ENST00000588410 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
TPM4-208ENST00000588410 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
TPM4-208ENST00000588410 LCE1CQ5T751 118 aa4.61□□□□□ -1.67
TPM4-208ENST00000588410 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
TPM4-208ENST00000588410 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
TPM4-208ENST00000588410 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
TPM4-208ENST00000588410 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
TPM4-208ENST00000588410 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
TPM4-208ENST00000588410 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
TPM4-208ENST00000588410 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
TPM4-208ENST00000588410 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
TPM4-208ENST00000588410 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
TPM4-208ENST00000588410 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
TPM4-208ENST00000588410 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
TPM4-208ENST00000588410 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
TPM4-208ENST00000588410 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
TPM4-208ENST00000588410 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
TPM4-208ENST00000588410 PRM1P04553 51 aa3.18□□□□□ -1.9
TPM4-208ENST00000588410 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
TPM4-208ENST00000588410 INE1O15225 51 aa2.67□□□□□ -1.98
TPM4-208ENST00000588410 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
TPM4-208ENST00000588410 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
TPM4-208ENST00000588410 H3BS24 57 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms