RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 A6NED7 52 aa7.4□□□□□ -1.22
LDLRAD4-212ENST00000587905 RPS28P62857 69 aaKnown RBP7.37□□□□□ -1.23
LDLRAD4-212ENST00000587905 MT1GP13640 62 aa7.3□□□□□ -1.24
LDLRAD4-212ENST00000587905 MT1LQ93083 61 aa7.28□□□□□ -1.24
LDLRAD4-212ENST00000587905 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
LDLRAD4-212ENST00000587905 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
LDLRAD4-212ENST00000587905 DSTQ03001 7570 aaKnown RBP7.23□□□□□ -1.25
LDLRAD4-212ENST00000587905 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
LDLRAD4-212ENST00000587905 MT1MQ8N339 61 aa7.2□□□□□ -1.26
LDLRAD4-212ENST00000587905 GPR98Q8WXG9 6306 aa7.09□□□□□ -1.27
LDLRAD4-212ENST00000587905 CDC42SE1Q9NRR8 79 aa7.09□□□□□ -1.27
LDLRAD4-212ENST00000587905 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
LDLRAD4-212ENST00000587905 ROMO1P60602 79 aa6.98□□□□□ -1.29
LDLRAD4-212ENST00000587905 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
LDLRAD4-212ENST00000587905 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
LDLRAD4-212ENST00000587905 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
LDLRAD4-212ENST00000587905 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
LDLRAD4-212ENST00000587905 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
LDLRAD4-212ENST00000587905 MT4P47944 62 aa6.76□□□□□ -1.33
LDLRAD4-212ENST00000587905 LCE1DQ5T752 114 aa6.76□□□□□ -1.33
LDLRAD4-212ENST00000587905 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
LDLRAD4-212ENST00000587905 KRTAP5-4Q6L8H1 288 aa6.68□□□□□ -1.34
LDLRAD4-212ENST00000587905 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
LDLRAD4-212ENST00000587905 BRK1Q8WUW1 75 aa6.61□□□□□ -1.35
LDLRAD4-212ENST00000587905 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
LDLRAD4-212ENST00000587905 HMCN1Q96RW7 5635 aa6.59□□□□□ -1.35
LDLRAD4-212ENST00000587905 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
LDLRAD4-212ENST00000587905 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
LDLRAD4-212ENST00000587905 AHNAK2Q8IVF2 5795 aa6.46□□□□□ -1.38
LDLRAD4-212ENST00000587905 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
LDLRAD4-212ENST00000587905 KRTAP12-4P60329 112 aa6.35□□□□□ -1.39
LDLRAD4-212ENST00000587905 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
LDLRAD4-212ENST00000587905 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
LDLRAD4-212ENST00000587905 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
LDLRAD4-212ENST00000587905 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
LDLRAD4-212ENST00000587905 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
LDLRAD4-212ENST00000587905 MT1AP04731 61 aa6.19□□□□□ -1.42
LDLRAD4-212ENST00000587905 KRTAP5-7Q6L8G8 165 aa6.17□□□□□ -1.42
LDLRAD4-212ENST00000587905 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
LDLRAD4-212ENST00000587905 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.42
LDLRAD4-212ENST00000587905 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
LDLRAD4-212ENST00000587905 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
LDLRAD4-212ENST00000587905 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.46
LDLRAD4-212ENST00000587905 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
LDLRAD4-212ENST00000587905 KRTAP6-2Q3LI66 62 aa5.85□□□□□ -1.47
LDLRAD4-212ENST00000587905 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
LDLRAD4-212ENST00000587905 MT3P25713 68 aa5.66□□□□□ -1.5
LDLRAD4-212ENST00000587905 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
LDLRAD4-212ENST00000587905 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
LDLRAD4-212ENST00000587905 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
LDLRAD4-212ENST00000587905 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
LDLRAD4-212ENST00000587905 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
LDLRAD4-212ENST00000587905 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
LDLRAD4-212ENST00000587905 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
LDLRAD4-212ENST00000587905 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
LDLRAD4-212ENST00000587905 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
LDLRAD4-212ENST00000587905 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
LDLRAD4-212ENST00000587905 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
LDLRAD4-212ENST00000587905 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
LDLRAD4-212ENST00000587905 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
LDLRAD4-212ENST00000587905 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
LDLRAD4-212ENST00000587905 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
LDLRAD4-212ENST00000587905 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
LDLRAD4-212ENST00000587905 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
LDLRAD4-212ENST00000587905 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
LDLRAD4-212ENST00000587905 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
LDLRAD4-212ENST00000587905 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
LDLRAD4-212ENST00000587905 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
LDLRAD4-212ENST00000587905 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
LDLRAD4-212ENST00000587905 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
LDLRAD4-212ENST00000587905 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
LDLRAD4-212ENST00000587905 PRM1P04553 51 aa3.61□□□□□ -1.83
LDLRAD4-212ENST00000587905 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
LDLRAD4-212ENST00000587905 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
LDLRAD4-212ENST00000587905 INE1O15225 51 aa3.34□□□□□ -1.87
LDLRAD4-212ENST00000587905 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
LDLRAD4-212ENST00000587905 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.04
LDLRAD4-212ENST00000587905 H3BS24 57 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 25.4 ms