RNA–Protein interactions for RNA: ENST00000587700.1

RFX2-209, Transcript of regulatory factor X2, human

TSL 2

Gene RFX2, Length 2,376 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-209	ENST00000587700	KRTAP10-10	P60014	251 aa		3.84	□□□□□ -1.79
RFX2-209	ENST00000587700	KRTAP20-1	Q3LI63	56 aa		3.84	□□□□□ -1.79
RFX2-209	ENST00000587700	KRTAP4-2	Q9BYR5	136 aa		3.84	□□□□□ -1.79
RFX2-209	ENST00000587700	KRTAP9-8	Q9BYQ0	159 aa		3.84	□□□□□ -1.79
RFX2-209	ENST00000587700	NEB	P20929	6669 aa		3.8	□□□□□ -1.8
RFX2-209	ENST00000587700	LCE3A	Q5TA76	89 aa		3.76	□□□□□ -1.81
RFX2-209	ENST00000587700	USH2A	O75445	5202 aa		3.74	□□□□□ -1.81
RFX2-209	ENST00000587700	KRTAP8-1	Q8IUC2	63 aa		3.73	□□□□□ -1.81
RFX2-209	ENST00000587700	KRTAP19-8	Q3LI54	63 aa		3.72	□□□□□ -1.81
RFX2-209	ENST00000587700	MT1B	P07438	61 aa		3.69	□□□□□ -1.82
RFX2-209	ENST00000587700	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.68	□□□□□ -1.82
RFX2-209	ENST00000587700	GPR98	Q8WXG9	6306 aa		3.66	□□□□□ -1.82
RFX2-209	ENST00000587700	KRTAP10-5	P60370	271 aa		3.65	□□□□□ -1.83
RFX2-209	ENST00000587700	SYNE2	Q8WXH0	6885 aa	Known RBP	3.65	□□□□□ -1.83
RFX2-209	ENST00000587700	MT1X	P80297	61 aa		3.65	□□□□□ -1.83
RFX2-209	ENST00000587700	MACF1	Q9UPN3	7388 aa	Known RBP	3.62	□□□□□ -1.83
RFX2-209	ENST00000587700	KRTAP2-3	P0C7H8	128 aa		3.6	□□□□□ -1.83
RFX2-209	ENST00000587700	KRTAP12-3	P60328	96 aa		3.6	□□□□□ -1.83
RFX2-209	ENST00000587700	KRTAP10-12	P60413	245 aa		3.6	□□□□□ -1.83
RFX2-209	ENST00000587700	KRTAP2-4	Q9BYR9	128 aa		3.6	□□□□□ -1.83
RFX2-209	ENST00000587700	KMT2D	O14686	5537 aa		3.58	□□□□□ -1.84
RFX2-209	ENST00000587700	KRTAP10-7	P60409	375 aa	Predicted RBP	3.57	□□□□□ -1.84
RFX2-209	ENST00000587700	LCE3C	Q5T5A8	94 aa		3.55	□□□□□ -1.84
RFX2-209	ENST00000587700	KRTAP19-6	Q3LI70	58 aa		3.52	□□□□□ -1.85
RFX2-209	ENST00000587700	KRTAP2-1	Q9BYU5	128 aa		3.43	□□□□□ -1.86
RFX2-209	ENST00000587700	KRTAP19-5	Q3LI72	72 aa		3.39	□□□□□ -1.87
RFX2-209	ENST00000587700	KRTAP5-9	P26371	169 aa		3.37	□□□□□ -1.87
RFX2-209	ENST00000587700	LCE1E	Q5T753	118 aa		3.36	□□□□□ -1.87
RFX2-209	ENST00000587700	LCE3E	Q5T5B0	92 aa		3.29	□□□□□ -1.88
RFX2-209	ENST00000587700	KRTAP5-3	Q6L8H2	238 aa		3.29	□□□□□ -1.88
RFX2-209	ENST00000587700	MUC12	Q9UKN1	5478 aa		3.28	□□□□□ -1.88
RFX2-209	ENST00000587700	KRTAP19-7	Q3SYF9	63 aa		3.25	□□□□□ -1.89
RFX2-209	ENST00000587700	KRTAP9-6	A8MVA2	160 aa		3.25	□□□□□ -1.89
RFX2-209	ENST00000587700	MDN1	Q9NU22	5596 aa		3.2	□□□□□ -1.9
RFX2-209	ENST00000587700	MT1L	Q93083	61 aa		3.15	□□□□□ -1.9
RFX2-209	ENST00000587700	MT1E	P04732	61 aa		3.15	□□□□□ -1.91
RFX2-209	ENST00000587700	KRTAP5-7	Q6L8G8	165 aa		3.11	□□□□□ -1.91
RFX2-209	ENST00000587700	SPRR2E	P22531	72 aa		3.09	□□□□□ -1.91
RFX2-209	ENST00000587700	SPRR2B	P35325	72 aa		3.09	□□□□□ -1.91
RFX2-209	ENST00000587700	SPRR2A	P35326	72 aa		3.09	□□□□□ -1.91
RFX2-209	ENST00000587700	DST	Q03001	7570 aa	Known RBP	3.09	□□□□□ -1.92
RFX2-209	ENST00000587700	KRTAP4-3	Q9BYR4	195 aa		3.06	□□□□□ -1.92
RFX2-209	ENST00000587700	AHNAK2	Q8IVF2	5795 aa		3.06	□□□□□ -1.92
RFX2-209	ENST00000587700	KRTAP5-10	Q6L8G5	202 aa		3.04	□□□□□ -1.92
RFX2-209	ENST00000587700	LCE3D	Q9BYE3	92 aa		3.03	□□□□□ -1.92
RFX2-209	ENST00000587700	SPRR2D	P22532	72 aa		3.02	□□□□□ -1.93
RFX2-209	ENST00000587700	KRTAP12-4	P60329	112 aa		3.02	□□□□□ -1.93
RFX2-209	ENST00000587700	MT1G	P13640	62 aa		2.96	□□□□□ -1.94
RFX2-209	ENST00000587700	KRTAP19-3	Q7Z4W3	81 aa		2.96	□□□□□ -1.94
RFX2-209	ENST00000587700	MT1M	Q8N339	61 aa		2.95	□□□□□ -1.94
RFX2-209	ENST00000587700	SPRR2F	Q96RM1	72 aa		2.95	□□□□□ -1.94
RFX2-209	ENST00000587700	AHNAK	Q09666	5890 aa	Known RBP	2.94	□□□□□ -1.94
RFX2-209	ENST00000587700	HMCN1	Q96RW7	5635 aa		2.89	□□□□□ -1.95
RFX2-209	ENST00000587700	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.88	□□□□□ -1.95
RFX2-209	ENST00000587700	SYNE1	Q8NF91	8797 aa	Known RBP	2.81	□□□□□ -1.96
RFX2-209	ENST00000587700	MT1A	P04731	61 aa		2.75	□□□□□ -1.97
RFX2-209	ENST00000587700	KRTAP5-11	Q6L8G4	156 aa		2.71	□□□□□ -1.98
RFX2-209	ENST00000587700	KRTAP6-1	Q3LI64	71 aa		2.68	□□□□□ -1.98
RFX2-209	ENST00000587700	OBSCN	Q5VST9	7968 aa		2.65	□□□□□ -1.99
RFX2-209	ENST00000587700	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.61	□□□□□ -1.99
RFX2-209	ENST00000587700	MUC5AC	P98088	5654 aa		2.61	□□□□□ -1.99
RFX2-209	ENST00000587700	MT4	P47944	62 aa		2.58	□□□□□ -2
RFX2-209	ENST00000587700	KRTAP5-4	Q6L8H1	288 aa		2.56	□□□□□ -2
RFX2-209	ENST00000587700	PRM1	P04553	51 aa		2.52	□□□□□ -2.01
RFX2-209	ENST00000587700	KRTAP6-2	Q3LI66	62 aa		2.43	□□□□□ -2.02
RFX2-209	ENST00000587700	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.41	□□□□□ -2.02
RFX2-209	ENST00000587700	KRTAP20-2	Q3LI61	65 aa		2.38	□□□□□ -2.03
RFX2-209	ENST00000587700	KRTAP5-8	O75690	187 aa		2.31	□□□□□ -2.04
RFX2-209	ENST00000587700	KRTAP5-1	Q6L8H4	278 aa		2.22	□□□□□ -2.05
RFX2-209	ENST00000587700	KRTAP5-2	Q701N4	177 aa		2.2	□□□□□ -2.06
RFX2-209	ENST00000587700	LCE1C	Q5T751	118 aa		2.14	□□□□□ -2.07
RFX2-209	ENST00000587700	LCE1B	Q5T7P3	118 aa		2.14	□□□□□ -2.07
RFX2-209	ENST00000587700	KRTAP4-4	Q9BYR3	166 aa		1.98	□□□□□ -2.09
RFX2-209	ENST00000587700	MUC19	Q7Z5P9	8384 aa		1.84	□□□□□ -2.12
RFX2-209	ENST00000587700	PHGR1	C9JFL3	82 aa		1.74	□□□□□ -2.13
RFX2-209	ENST00000587700	KRTAP21-2	Q3LI59	83 aa		1.72	□□□□□ -2.13
RFX2-209	ENST00000587700	KRTAP21-1	Q3LI58	79 aa		1.64	□□□□□ -2.15
RFX2-209	ENST00000587700	MUC16	Q8WXI7	14507 aa		0.99	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 85.5 ms