RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
TNFRSF11A-203ENST00000587697 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
TNFRSF11A-203ENST00000587697 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
TNFRSF11A-203ENST00000587697 MT1GP13640 62 aa4.16□□□□□ -1.74
TNFRSF11A-203ENST00000587697 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
TNFRSF11A-203ENST00000587697 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
TNFRSF11A-203ENST00000587697 MT1MQ8N339 61 aa4.13□□□□□ -1.75
TNFRSF11A-203ENST00000587697 SPRR2EP22531 72 aa4.12□□□□□ -1.75
TNFRSF11A-203ENST00000587697 SPRR2BP35325 72 aa4.12□□□□□ -1.75
TNFRSF11A-203ENST00000587697 SPRR2AP35326 72 aa4.12□□□□□ -1.75
TNFRSF11A-203ENST00000587697 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
TNFRSF11A-203ENST00000587697 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
TNFRSF11A-203ENST00000587697 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
TNFRSF11A-203ENST00000587697 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
TNFRSF11A-203ENST00000587697 SPRR2DP22532 72 aa3.97□□□□□ -1.77
TNFRSF11A-203ENST00000587697 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
TNFRSF11A-203ENST00000587697 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
TNFRSF11A-203ENST00000587697 NEBP20929 6669 aa3.9□□□□□ -1.78
TNFRSF11A-203ENST00000587697 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
TNFRSF11A-203ENST00000587697 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
TNFRSF11A-203ENST00000587697 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
TNFRSF11A-203ENST00000587697 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
TNFRSF11A-203ENST00000587697 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
TNFRSF11A-203ENST00000587697 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
TNFRSF11A-203ENST00000587697 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
TNFRSF11A-203ENST00000587697 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
TNFRSF11A-203ENST00000587697 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
TNFRSF11A-203ENST00000587697 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
TNFRSF11A-203ENST00000587697 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
TNFRSF11A-203ENST00000587697 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
TNFRSF11A-203ENST00000587697 MT1AP04731 61 aa3.64□□□□□ -1.83
TNFRSF11A-203ENST00000587697 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
TNFRSF11A-203ENST00000587697 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
TNFRSF11A-203ENST00000587697 H3BS24 57 aa3.58□□□□□ -1.84
TNFRSF11A-203ENST00000587697 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
TNFRSF11A-203ENST00000587697 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
TNFRSF11A-203ENST00000587697 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
TNFRSF11A-203ENST00000587697 MT4P47944 62 aa3.43□□□□□ -1.86
TNFRSF11A-203ENST00000587697 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
TNFRSF11A-203ENST00000587697 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
TNFRSF11A-203ENST00000587697 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
TNFRSF11A-203ENST00000587697 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
TNFRSF11A-203ENST00000587697 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
TNFRSF11A-203ENST00000587697 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
TNFRSF11A-203ENST00000587697 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
TNFRSF11A-203ENST00000587697 MT3P25713 68 aa3.27□□□□□ -1.89
TNFRSF11A-203ENST00000587697 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
TNFRSF11A-203ENST00000587697 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
TNFRSF11A-203ENST00000587697 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
TNFRSF11A-203ENST00000587697 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
TNFRSF11A-203ENST00000587697 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
TNFRSF11A-203ENST00000587697 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
TNFRSF11A-203ENST00000587697 INE1O15225 51 aa3.05□□□□□ -1.92
TNFRSF11A-203ENST00000587697 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
TNFRSF11A-203ENST00000587697 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
TNFRSF11A-203ENST00000587697 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
TNFRSF11A-203ENST00000587697 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
TNFRSF11A-203ENST00000587697 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
TNFRSF11A-203ENST00000587697 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
TNFRSF11A-203ENST00000587697 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
TNFRSF11A-203ENST00000587697 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
TNFRSF11A-203ENST00000587697 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
TNFRSF11A-203ENST00000587697 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
TNFRSF11A-203ENST00000587697 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
TNFRSF11A-203ENST00000587697 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
TNFRSF11A-203ENST00000587697 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
TNFRSF11A-203ENST00000587697 PRM1P04553 51 aa2.57□□□□□ -2
TNFRSF11A-203ENST00000587697 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
TNFRSF11A-203ENST00000587697 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
TNFRSF11A-203ENST00000587697 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
TNFRSF11A-203ENST00000587697 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
TNFRSF11A-203ENST00000587697 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
TNFRSF11A-203ENST00000587697 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
TNFRSF11A-203ENST00000587697 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
TNFRSF11A-203ENST00000587697 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
TNFRSF11A-203ENST00000587697 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
TNFRSF11A-203ENST00000587697 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
TNFRSF11A-203ENST00000587697 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 74.6 ms