RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
RUNDC3A-203ENST00000587483 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
RUNDC3A-203ENST00000587483 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
RUNDC3A-203ENST00000587483 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
RUNDC3A-203ENST00000587483 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
RUNDC3A-203ENST00000587483 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
RUNDC3A-203ENST00000587483 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
RUNDC3A-203ENST00000587483 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
RUNDC3A-203ENST00000587483 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
RUNDC3A-203ENST00000587483 MT1LQ93083 61 aa3.77□□□□□ -1.81
RUNDC3A-203ENST00000587483 MT1GP13640 62 aa3.76□□□□□ -1.81
RUNDC3A-203ENST00000587483 MT1EP04732 61 aa3.76□□□□□ -1.81
RUNDC3A-203ENST00000587483 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
RUNDC3A-203ENST00000587483 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
RUNDC3A-203ENST00000587483 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
RUNDC3A-203ENST00000587483 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
RUNDC3A-203ENST00000587483 SPRR2EP22531 72 aa3.58□□□□□ -1.84
RUNDC3A-203ENST00000587483 SPRR2BP35325 72 aa3.58□□□□□ -1.84
RUNDC3A-203ENST00000587483 SPRR2AP35326 72 aa3.58□□□□□ -1.84
RUNDC3A-203ENST00000587483 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
RUNDC3A-203ENST00000587483 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
RUNDC3A-203ENST00000587483 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
RUNDC3A-203ENST00000587483 MT1MQ8N339 61 aa3.51□□□□□ -1.85
RUNDC3A-203ENST00000587483 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
RUNDC3A-203ENST00000587483 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
RUNDC3A-203ENST00000587483 SPRR2DP22532 72 aa3.42□□□□□ -1.86
RUNDC3A-203ENST00000587483 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
RUNDC3A-203ENST00000587483 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
RUNDC3A-203ENST00000587483 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
RUNDC3A-203ENST00000587483 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.89
RUNDC3A-203ENST00000587483 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
RUNDC3A-203ENST00000587483 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
RUNDC3A-203ENST00000587483 MT4P47944 62 aa3.24□□□□□ -1.89
RUNDC3A-203ENST00000587483 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
RUNDC3A-203ENST00000587483 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
RUNDC3A-203ENST00000587483 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
RUNDC3A-203ENST00000587483 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
RUNDC3A-203ENST00000587483 PRM1P04553 51 aa3.18□□□□□ -1.9
RUNDC3A-203ENST00000587483 MT1AP04731 61 aa3.18□□□□□ -1.9
RUNDC3A-203ENST00000587483 NEBP20929 6669 aa3.09□□□□□ -1.91
RUNDC3A-203ENST00000587483 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
RUNDC3A-203ENST00000587483 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
RUNDC3A-203ENST00000587483 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
RUNDC3A-203ENST00000587483 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
RUNDC3A-203ENST00000587483 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
RUNDC3A-203ENST00000587483 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
RUNDC3A-203ENST00000587483 MT3P25713 68 aa2.88□□□□□ -1.95
RUNDC3A-203ENST00000587483 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
RUNDC3A-203ENST00000587483 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
RUNDC3A-203ENST00000587483 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
RUNDC3A-203ENST00000587483 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
RUNDC3A-203ENST00000587483 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
RUNDC3A-203ENST00000587483 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
RUNDC3A-203ENST00000587483 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
RUNDC3A-203ENST00000587483 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
RUNDC3A-203ENST00000587483 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
RUNDC3A-203ENST00000587483 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
RUNDC3A-203ENST00000587483 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
RUNDC3A-203ENST00000587483 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
RUNDC3A-203ENST00000587483 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
RUNDC3A-203ENST00000587483 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
RUNDC3A-203ENST00000587483 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
RUNDC3A-203ENST00000587483 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
RUNDC3A-203ENST00000587483 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
RUNDC3A-203ENST00000587483 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
RUNDC3A-203ENST00000587483 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
RUNDC3A-203ENST00000587483 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
RUNDC3A-203ENST00000587483 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
RUNDC3A-203ENST00000587483 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
RUNDC3A-203ENST00000587483 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
RUNDC3A-203ENST00000587483 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
RUNDC3A-203ENST00000587483 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
RUNDC3A-203ENST00000587483 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
RUNDC3A-203ENST00000587483 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
RUNDC3A-203ENST00000587483 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
RUNDC3A-203ENST00000587483 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
RUNDC3A-203ENST00000587483 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
RUNDC3A-203ENST00000587483 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms