RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
CXXC1-209ENST00000587342 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
CXXC1-209ENST00000587342 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
CXXC1-209ENST00000587342 HMCN1Q96RW7 5635 aa5.54□□□□□ -1.52
CXXC1-209ENST00000587342 MT4P47944 62 aa5.53□□□□□ -1.52
CXXC1-209ENST00000587342 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
CXXC1-209ENST00000587342 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
CXXC1-209ENST00000587342 UQCR11O14957 56 aa5.5□□□□□ -1.53
CXXC1-209ENST00000587342 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
CXXC1-209ENST00000587342 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
CXXC1-209ENST00000587342 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
CXXC1-209ENST00000587342 MIR22HGQ0VDD5 57 aa5.4□□□□□ -1.54
CXXC1-209ENST00000587342 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
CXXC1-209ENST00000587342 V9GYY9 64 aa5.36□□□□□ -1.55
CXXC1-209ENST00000587342 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
CXXC1-209ENST00000587342 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
CXXC1-209ENST00000587342 PSPHP1O15172 72 aa5.31□□□□□ -1.56
CXXC1-209ENST00000587342 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
CXXC1-209ENST00000587342 Q1T7F1 81 aa5.27□□□□□ -1.57
CXXC1-209ENST00000587342 KRTAP5-10Q6L8G5 202 aa5.24□□□□□ -1.57
CXXC1-209ENST00000587342 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
CXXC1-209ENST00000587342 K7ERS5 55 aa5.21□□□□□ -1.58
CXXC1-209ENST00000587342 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
CXXC1-209ENST00000587342 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
CXXC1-209ENST00000587342 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
CXXC1-209ENST00000587342 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
CXXC1-209ENST00000587342 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
CXXC1-209ENST00000587342 A6NED7 52 aa5.07□□□□□ -1.6
CXXC1-209ENST00000587342 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
CXXC1-209ENST00000587342 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
CXXC1-209ENST00000587342 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
CXXC1-209ENST00000587342 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
CXXC1-209ENST00000587342 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
CXXC1-209ENST00000587342 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
CXXC1-209ENST00000587342 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
CXXC1-209ENST00000587342 ROMO1P60602 79 aa4.94□□□□□ -1.62
CXXC1-209ENST00000587342 MT1AP04731 61 aa4.88□□□□□ -1.63
CXXC1-209ENST00000587342 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
CXXC1-209ENST00000587342 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
CXXC1-209ENST00000587342 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
CXXC1-209ENST00000587342 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
CXXC1-209ENST00000587342 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
CXXC1-209ENST00000587342 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
CXXC1-209ENST00000587342 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
CXXC1-209ENST00000587342 H3BS24 57 aa4.65□□□□□ -1.67
CXXC1-209ENST00000587342 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
CXXC1-209ENST00000587342 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
CXXC1-209ENST00000587342 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
CXXC1-209ENST00000587342 MT3P25713 68 aa4.41□□□□□ -1.7
CXXC1-209ENST00000587342 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
CXXC1-209ENST00000587342 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
CXXC1-209ENST00000587342 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
CXXC1-209ENST00000587342 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
CXXC1-209ENST00000587342 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
CXXC1-209ENST00000587342 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
CXXC1-209ENST00000587342 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
CXXC1-209ENST00000587342 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
CXXC1-209ENST00000587342 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
CXXC1-209ENST00000587342 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
CXXC1-209ENST00000587342 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
CXXC1-209ENST00000587342 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
CXXC1-209ENST00000587342 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
CXXC1-209ENST00000587342 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
CXXC1-209ENST00000587342 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
CXXC1-209ENST00000587342 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
CXXC1-209ENST00000587342 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
CXXC1-209ENST00000587342 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
CXXC1-209ENST00000587342 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
CXXC1-209ENST00000587342 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
CXXC1-209ENST00000587342 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
CXXC1-209ENST00000587342 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
CXXC1-209ENST00000587342 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
CXXC1-209ENST00000587342 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CXXC1-209ENST00000587342 INE1O15225 51 aa2.8□□□□□ -1.96
CXXC1-209ENST00000587342 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
CXXC1-209ENST00000587342 PRM1P04553 51 aa2.55□□□□□ -2
CXXC1-209ENST00000587342 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
CXXC1-209ENST00000587342 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 40.7 ms