RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 MT1EP04732 61 aa5.8□□□□□ -1.48
PRKCSH-205ENST00000587327 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
PRKCSH-205ENST00000587327 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
PRKCSH-205ENST00000587327 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
PRKCSH-205ENST00000587327 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
PRKCSH-205ENST00000587327 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
PRKCSH-205ENST00000587327 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
PRKCSH-205ENST00000587327 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
PRKCSH-205ENST00000587327 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
PRKCSH-205ENST00000587327 MT1MQ8N339 61 aa5.44□□□□□ -1.54
PRKCSH-205ENST00000587327 MT1GP13640 62 aa5.42□□□□□ -1.54
PRKCSH-205ENST00000587327 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
PRKCSH-205ENST00000587327 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
PRKCSH-205ENST00000587327 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
PRKCSH-205ENST00000587327 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
PRKCSH-205ENST00000587327 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
PRKCSH-205ENST00000587327 KRTAP5-9P26371 169 aa5.15□□□□□ -1.58
PRKCSH-205ENST00000587327 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
PRKCSH-205ENST00000587327 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
PRKCSH-205ENST00000587327 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
PRKCSH-205ENST00000587327 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
PRKCSH-205ENST00000587327 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
PRKCSH-205ENST00000587327 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
PRKCSH-205ENST00000587327 SPRR2EP22531 72 aa4.98□□□□□ -1.61
PRKCSH-205ENST00000587327 SPRR2BP35325 72 aa4.98□□□□□ -1.61
PRKCSH-205ENST00000587327 SPRR2AP35326 72 aa4.98□□□□□ -1.61
PRKCSH-205ENST00000587327 MT1AP04731 61 aa4.94□□□□□ -1.62
PRKCSH-205ENST00000587327 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
PRKCSH-205ENST00000587327 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
PRKCSH-205ENST00000587327 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
PRKCSH-205ENST00000587327 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
PRKCSH-205ENST00000587327 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
PRKCSH-205ENST00000587327 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
PRKCSH-205ENST00000587327 SPRR2DP22532 72 aa4.78□□□□□ -1.64
PRKCSH-205ENST00000587327 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
PRKCSH-205ENST00000587327 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
PRKCSH-205ENST00000587327 PRM1P04553 51 aa4.54□□□□□ -1.68
PRKCSH-205ENST00000587327 NEBP20929 6669 aa4.53□□□□□ -1.68
PRKCSH-205ENST00000587327 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
PRKCSH-205ENST00000587327 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
PRKCSH-205ENST00000587327 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
PRKCSH-205ENST00000587327 MT3P25713 68 aa4.38□□□□□ -1.71
PRKCSH-205ENST00000587327 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
PRKCSH-205ENST00000587327 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
PRKCSH-205ENST00000587327 MT4P47944 62 aa4.19□□□□□ -1.74
PRKCSH-205ENST00000587327 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
PRKCSH-205ENST00000587327 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
PRKCSH-205ENST00000587327 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
PRKCSH-205ENST00000587327 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
PRKCSH-205ENST00000587327 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
PRKCSH-205ENST00000587327 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
PRKCSH-205ENST00000587327 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
PRKCSH-205ENST00000587327 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
PRKCSH-205ENST00000587327 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
PRKCSH-205ENST00000587327 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
PRKCSH-205ENST00000587327 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
PRKCSH-205ENST00000587327 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
PRKCSH-205ENST00000587327 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
PRKCSH-205ENST00000587327 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
PRKCSH-205ENST00000587327 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
PRKCSH-205ENST00000587327 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
PRKCSH-205ENST00000587327 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
PRKCSH-205ENST00000587327 KRTAP5-8O75690 187 aa3.34□□□□□ -1.88
PRKCSH-205ENST00000587327 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
PRKCSH-205ENST00000587327 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
PRKCSH-205ENST00000587327 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
PRKCSH-205ENST00000587327 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
PRKCSH-205ENST00000587327 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.94
PRKCSH-205ENST00000587327 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
PRKCSH-205ENST00000587327 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
PRKCSH-205ENST00000587327 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
PRKCSH-205ENST00000587327 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
PRKCSH-205ENST00000587327 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
PRKCSH-205ENST00000587327 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
PRKCSH-205ENST00000587327 PHGR1C9JFL3 82 aa2.58□□□□□ -2
PRKCSH-205ENST00000587327 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
PRKCSH-205ENST00000587327 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 61.5 ms