RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 SMIM26A0A096LP01 95 aa5.18□□□□□ -1.58
PRKCSH-204ENST00000587290 H7BZZ5 65 aa5.18□□□□□ -1.58
PRKCSH-204ENST00000587290 TNP1P09430 55 aa5.17□□□□□ -1.58
PRKCSH-204ENST00000587290 COX7CP15954 63 aa5.17□□□□□ -1.58
PRKCSH-204ENST00000587290 A0A1B0GU69 56 aa5.16□□□□□ -1.58
PRKCSH-204ENST00000587290 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
PRKCSH-204ENST00000587290 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
PRKCSH-204ENST00000587290 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
PRKCSH-204ENST00000587290 PCP4P48539 62 aa5.02□□□□□ -1.61
PRKCSH-204ENST00000587290 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
PRKCSH-204ENST00000587290 KRTAP5-7Q6L8G8 165 aa5.02□□□□□ -1.61
PRKCSH-204ENST00000587290 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
PRKCSH-204ENST00000587290 ATP5EP56381 51 aaPredicted RBP4.99□□□□□ -1.61
PRKCSH-204ENST00000587290 TMEM258P61165 79 aa4.96□□□□□ -1.62
PRKCSH-204ENST00000587290 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
PRKCSH-204ENST00000587290 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
PRKCSH-204ENST00000587290 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
PRKCSH-204ENST00000587290 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
PRKCSH-204ENST00000587290 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
PRKCSH-204ENST00000587290 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
PRKCSH-204ENST00000587290 UQCR11O14957 56 aa4.74□□□□□ -1.65
PRKCSH-204ENST00000587290 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
PRKCSH-204ENST00000587290 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
PRKCSH-204ENST00000587290 V9GYY9 64 aa4.65□□□□□ -1.67
PRKCSH-204ENST00000587290 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
PRKCSH-204ENST00000587290 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
PRKCSH-204ENST00000587290 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
PRKCSH-204ENST00000587290 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
PRKCSH-204ENST00000587290 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
PRKCSH-204ENST00000587290 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
PRKCSH-204ENST00000587290 Q1T7F1 81 aa4.57□□□□□ -1.68
PRKCSH-204ENST00000587290 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
PRKCSH-204ENST00000587290 MT1AP04731 61 aa4.56□□□□□ -1.68
PRKCSH-204ENST00000587290 K7ERS5 55 aa4.53□□□□□ -1.68
PRKCSH-204ENST00000587290 KRTAP5-8O75690 187 aa4.49□□□□□ -1.69
PRKCSH-204ENST00000587290 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
PRKCSH-204ENST00000587290 PSPHP1O15172 72 aa4.47□□□□□ -1.69
PRKCSH-204ENST00000587290 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
PRKCSH-204ENST00000587290 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
PRKCSH-204ENST00000587290 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
PRKCSH-204ENST00000587290 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
PRKCSH-204ENST00000587290 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
PRKCSH-204ENST00000587290 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
PRKCSH-204ENST00000587290 A6NED7 52 aa4.38□□□□□ -1.71
PRKCSH-204ENST00000587290 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
PRKCSH-204ENST00000587290 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
PRKCSH-204ENST00000587290 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
PRKCSH-204ENST00000587290 SVIPQ8NHG7 77 aa4.24□□□□□ -1.73
PRKCSH-204ENST00000587290 ROMO1P60602 79 aa4.23□□□□□ -1.73
PRKCSH-204ENST00000587290 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
PRKCSH-204ENST00000587290 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
PRKCSH-204ENST00000587290 MT3P25713 68 aa4.15□□□□□ -1.75
PRKCSH-204ENST00000587290 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
PRKCSH-204ENST00000587290 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
PRKCSH-204ENST00000587290 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
PRKCSH-204ENST00000587290 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
PRKCSH-204ENST00000587290 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
PRKCSH-204ENST00000587290 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
PRKCSH-204ENST00000587290 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
PRKCSH-204ENST00000587290 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
PRKCSH-204ENST00000587290 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
PRKCSH-204ENST00000587290 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
PRKCSH-204ENST00000587290 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
PRKCSH-204ENST00000587290 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
PRKCSH-204ENST00000587290 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
PRKCSH-204ENST00000587290 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
PRKCSH-204ENST00000587290 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
PRKCSH-204ENST00000587290 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
PRKCSH-204ENST00000587290 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
PRKCSH-204ENST00000587290 H3BS24 57 aa2.94□□□□□ -1.94
PRKCSH-204ENST00000587290 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
PRKCSH-204ENST00000587290 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
PRKCSH-204ENST00000587290 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
PRKCSH-204ENST00000587290 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
PRKCSH-204ENST00000587290 INE1O15225 51 aa2.46□□□□□ -2.02
PRKCSH-204ENST00000587290 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
PRKCSH-204ENST00000587290 PRM1P04553 51 aa2.2□□□□□ -2.06
PRKCSH-204ENST00000587290 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 80.3 ms