RNA–Protein interactions for RNA: ENST00000587215.1

PKN1-209, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 363 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-209ENST00000587215 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
PKN1-209ENST00000587215 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
PKN1-209ENST00000587215 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
PKN1-209ENST00000587215 CCDC179H3BU77 68 aa5.61□□□□□ -1.51
PKN1-209ENST00000587215 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
PKN1-209ENST00000587215 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
PKN1-209ENST00000587215 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
PKN1-209ENST00000587215 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
PKN1-209ENST00000587215 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
PKN1-209ENST00000587215 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
PKN1-209ENST00000587215 UQCR11O14957 56 aa5.44□□□□□ -1.54
PKN1-209ENST00000587215 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
PKN1-209ENST00000587215 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
PKN1-209ENST00000587215 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
PKN1-209ENST00000587215 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
PKN1-209ENST00000587215 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
PKN1-209ENST00000587215 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
PKN1-209ENST00000587215 KRTAP5-7Q6L8G8 165 aa5.34□□□□□ -1.55
PKN1-209ENST00000587215 TMEM258P61165 79 aa5.33□□□□□ -1.56
PKN1-209ENST00000587215 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
PKN1-209ENST00000587215 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
PKN1-209ENST00000587215 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
PKN1-209ENST00000587215 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
PKN1-209ENST00000587215 K7ERS5 55 aa5.19□□□□□ -1.58
PKN1-209ENST00000587215 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
PKN1-209ENST00000587215 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
PKN1-209ENST00000587215 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
PKN1-209ENST00000587215 PSPHP1O15172 72 aa5.13□□□□□ -1.59
PKN1-209ENST00000587215 V9GYY9 64 aa5.08□□□□□ -1.6
PKN1-209ENST00000587215 Q1T7F1 81 aa5.07□□□□□ -1.6
PKN1-209ENST00000587215 MT1AP04731 61 aa5□□□□□ -1.61
PKN1-209ENST00000587215 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
PKN1-209ENST00000587215 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
PKN1-209ENST00000587215 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
PKN1-209ENST00000587215 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
PKN1-209ENST00000587215 A6NED7 52 aa4.91□□□□□ -1.62
PKN1-209ENST00000587215 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
PKN1-209ENST00000587215 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
PKN1-209ENST00000587215 ROMO1P60602 79 aa4.86□□□□□ -1.63
PKN1-209ENST00000587215 RPS28P62857 69 aaKnown RBP4.83□□□□□ -1.64
PKN1-209ENST00000587215 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
PKN1-209ENST00000587215 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
PKN1-209ENST00000587215 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
PKN1-209ENST00000587215 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
PKN1-209ENST00000587215 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
PKN1-209ENST00000587215 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
PKN1-209ENST00000587215 MT3P25713 68 aa4.58□□□□□ -1.68
PKN1-209ENST00000587215 PCP4P48539 62 aa4.58□□□□□ -1.68
PKN1-209ENST00000587215 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
PKN1-209ENST00000587215 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
PKN1-209ENST00000587215 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
PKN1-209ENST00000587215 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
PKN1-209ENST00000587215 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
PKN1-209ENST00000587215 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
PKN1-209ENST00000587215 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
PKN1-209ENST00000587215 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
PKN1-209ENST00000587215 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
PKN1-209ENST00000587215 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
PKN1-209ENST00000587215 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
PKN1-209ENST00000587215 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
PKN1-209ENST00000587215 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
PKN1-209ENST00000587215 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
PKN1-209ENST00000587215 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
PKN1-209ENST00000587215 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
PKN1-209ENST00000587215 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
PKN1-209ENST00000587215 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
PKN1-209ENST00000587215 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
PKN1-209ENST00000587215 SVIPQ8NHG7 77 aa3.22□□□□□ -1.89
PKN1-209ENST00000587215 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
PKN1-209ENST00000587215 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
PKN1-209ENST00000587215 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
PKN1-209ENST00000587215 NDUFAF8A1L188 74 aa2.53□□□□□ -2
PKN1-209ENST00000587215 PRM1P04553 51 aa2.48□□□□□ -2.01
PKN1-209ENST00000587215 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
PKN1-209ENST00000587215 H3BS24 57 aa2.34□□□□□ -2.03
PKN1-209ENST00000587215 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
PKN1-209ENST00000587215 INE1O15225 51 aa2.19□□□□□ -2.06
PKN1-209ENST00000587215 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 32.6 ms