RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
CLPTM1-206ENST00000586975 MT4P47944 62 aa6.61□□□□□ -1.35
CLPTM1-206ENST00000586975 UQCR11O14957 56 aa6.6□□□□□ -1.35
CLPTM1-206ENST00000586975 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
CLPTM1-206ENST00000586975 TMEM258P61165 79 aa6.59□□□□□ -1.35
CLPTM1-206ENST00000586975 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
CLPTM1-206ENST00000586975 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
CLPTM1-206ENST00000586975 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
CLPTM1-206ENST00000586975 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
CLPTM1-206ENST00000586975 KRTAP5-4Q6L8H1 288 aa6.42□□□□□ -1.38
CLPTM1-206ENST00000586975 K7ERS5 55 aa6.38□□□□□ -1.39
CLPTM1-206ENST00000586975 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
CLPTM1-206ENST00000586975 KRTAP25-1Q3LHN0 102 aa6.37□□□□□ -1.39
CLPTM1-206ENST00000586975 PSPHP1O15172 72 aa6.32□□□□□ -1.4
CLPTM1-206ENST00000586975 V9GYY9 64 aa6.27□□□□□ -1.41
CLPTM1-206ENST00000586975 AHNAK2Q8IVF2 5795 aa6.26□□□□□ -1.41
CLPTM1-206ENST00000586975 Q1T7F1 81 aa6.2□□□□□ -1.42
CLPTM1-206ENST00000586975 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
CLPTM1-206ENST00000586975 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
CLPTM1-206ENST00000586975 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
CLPTM1-206ENST00000586975 KRTAP20-2Q3LI61 65 aa6.11□□□□□ -1.43
CLPTM1-206ENST00000586975 A6NED7 52 aa6.1□□□□□ -1.43
CLPTM1-206ENST00000586975 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
CLPTM1-206ENST00000586975 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
CLPTM1-206ENST00000586975 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
CLPTM1-206ENST00000586975 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
CLPTM1-206ENST00000586975 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
CLPTM1-206ENST00000586975 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
CLPTM1-206ENST00000586975 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
CLPTM1-206ENST00000586975 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
CLPTM1-206ENST00000586975 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
CLPTM1-206ENST00000586975 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
CLPTM1-206ENST00000586975 ROMO1P60602 79 aa5.9□□□□□ -1.46
CLPTM1-206ENST00000586975 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
CLPTM1-206ENST00000586975 MT1AP04731 61 aa5.75□□□□□ -1.49
CLPTM1-206ENST00000586975 KRTAP6-1Q3LI64 71 aa5.74□□□□□ -1.49
CLPTM1-206ENST00000586975 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
CLPTM1-206ENST00000586975 PCP4P48539 62 aa5.64□□□□□ -1.51
CLPTM1-206ENST00000586975 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
CLPTM1-206ENST00000586975 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
CLPTM1-206ENST00000586975 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
CLPTM1-206ENST00000586975 KRTAP6-2Q3LI66 62 aa5.51□□□□□ -1.53
CLPTM1-206ENST00000586975 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
CLPTM1-206ENST00000586975 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
CLPTM1-206ENST00000586975 MT3P25713 68 aa5.28□□□□□ -1.56
CLPTM1-206ENST00000586975 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
CLPTM1-206ENST00000586975 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.59
CLPTM1-206ENST00000586975 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
CLPTM1-206ENST00000586975 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
CLPTM1-206ENST00000586975 BRK1Q8WUW1 75 aa5.14□□□□□ -1.59
CLPTM1-206ENST00000586975 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
CLPTM1-206ENST00000586975 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
CLPTM1-206ENST00000586975 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
CLPTM1-206ENST00000586975 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
CLPTM1-206ENST00000586975 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
CLPTM1-206ENST00000586975 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
CLPTM1-206ENST00000586975 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
CLPTM1-206ENST00000586975 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
CLPTM1-206ENST00000586975 PRO0628Q9UI54 55 aa4.28□□□□□ -1.72
CLPTM1-206ENST00000586975 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
CLPTM1-206ENST00000586975 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
CLPTM1-206ENST00000586975 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
CLPTM1-206ENST00000586975 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
CLPTM1-206ENST00000586975 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
CLPTM1-206ENST00000586975 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
CLPTM1-206ENST00000586975 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
CLPTM1-206ENST00000586975 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
CLPTM1-206ENST00000586975 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
CLPTM1-206ENST00000586975 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
CLPTM1-206ENST00000586975 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
CLPTM1-206ENST00000586975 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
CLPTM1-206ENST00000586975 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
CLPTM1-206ENST00000586975 PRM1P04553 51 aa3.04□□□□□ -1.92
CLPTM1-206ENST00000586975 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
CLPTM1-206ENST00000586975 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
CLPTM1-206ENST00000586975 H3BS24 57 aa2.57□□□□□ -2
CLPTM1-206ENST00000586975 INE1O15225 51 aa2.46□□□□□ -2.02
CLPTM1-206ENST00000586975 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 40.2 ms