RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 PP632Q6XCG6 107 aa8.57□□□□□ -1.04
ERCC2-209ENST00000586856 DSTQ03001 7570 aaKnown RBP8.56□□□□□ -1.04
ERCC2-209ENST00000586856 K7ERS5 55 aa8.52□□□□□ -1.05
ERCC2-209ENST00000586856 MT1MQ8N339 61 aa8.52□□□□□ -1.05
ERCC2-209ENST00000586856 KRTAP25-1Q3LHN0 102 aa8.43□□□□□ -1.06
ERCC2-209ENST00000586856 KRTAP12-3P60328 96 aa8.41□□□□□ -1.06
ERCC2-209ENST00000586856 A6NED7 52 aa8.38□□□□□ -1.07
ERCC2-209ENST00000586856 PCP4P48539 62 aa8.36□□□□□ -1.07
ERCC2-209ENST00000586856 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
ERCC2-209ENST00000586856 KRTAP4-3Q9BYR4 195 aa8.31□□□□□ -1.08
ERCC2-209ENST00000586856 KRTAP4-9Q9BYQ8 210 aa8.27□□□□□ -1.09
ERCC2-209ENST00000586856 GPR98Q8WXG9 6306 aa8.19□□□□□ -1.1
ERCC2-209ENST00000586856 KRTAP4-7Q9BYR0 210 aa8.18□□□□□ -1.1
ERCC2-209ENST00000586856 LCE4AQ5TA78 99 aa8.11□□□□□ -1.11
ERCC2-209ENST00000586856 CDC42SE1Q9NRR8 79 aa8.11□□□□□ -1.11
ERCC2-209ENST00000586856 KRTAP23-1A1A580 65 aa8.09□□□□□ -1.11
ERCC2-209ENST00000586856 LCE1DQ5T752 114 aa8.08□□□□□ -1.12
ERCC2-209ENST00000586856 MT4P47944 62 aa8.02□□□□□ -1.13
ERCC2-209ENST00000586856 HMCN1Q96RW7 5635 aa8.02□□□□□ -1.13
ERCC2-209ENST00000586856 KRTAP5-4Q6L8H1 288 aa8.01□□□□□ -1.13
ERCC2-209ENST00000586856 ROMO1P60602 79 aa7.98□□□□□ -1.13
ERCC2-209ENST00000586856 KRTAP15-1Q3LI76 137 aa7.91□□□□□ -1.14
ERCC2-209ENST00000586856 KRTAP19-4Q3LI73 84 aa7.89□□□□□ -1.15
ERCC2-209ENST00000586856 KRTAP4-6Q9BYQ5 205 aa7.8□□□□□ -1.16
ERCC2-209ENST00000586856 KRTAP5-5Q701N2 237 aaPredicted RBP7.79□□□□□ -1.16
ERCC2-209ENST00000586856 LCE3CQ5T5A8 94 aa7.75□□□□□ -1.17
ERCC2-209ENST00000586856 LOC100996750A0A140TA64 210 aa7.73□□□□□ -1.17
ERCC2-209ENST00000586856 AHNAK2Q8IVF2 5795 aa7.72□□□□□ -1.17
ERCC2-209ENST00000586856 KRTAP20-2Q3LI61 65 aa7.55□□□□□ -1.2
ERCC2-209ENST00000586856 KRTAP5-10Q6L8G5 202 aa7.54□□□□□ -1.2
ERCC2-209ENST00000586856 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
ERCC2-209ENST00000586856 KRTAP12-4P60329 112 aa7.52□□□□□ -1.21
ERCC2-209ENST00000586856 SYNE1Q8NF91 8797 aaKnown RBP7.42□□□□□ -1.22
ERCC2-209ENST00000586856 KRTAP5-3Q6L8H2 238 aa7.36□□□□□ -1.23
ERCC2-209ENST00000586856 BRK1Q8WUW1 75 aa7.36□□□□□ -1.23
ERCC2-209ENST00000586856 KRTAP9-6A8MVA2 160 aa7.33□□□□□ -1.24
ERCC2-209ENST00000586856 MT1AP04731 61 aa7.32□□□□□ -1.24
ERCC2-209ENST00000586856 KRTAP6-1Q3LI64 71 aa7.26□□□□□ -1.25
ERCC2-209ENST00000586856 KRTAP5-7Q6L8G8 165 aa7.25□□□□□ -1.25
ERCC2-209ENST00000586856 KRTAP5-2Q701N4 177 aa7.06□□□□□ -1.28
ERCC2-209ENST00000586856 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
ERCC2-209ENST00000586856 KRTAP6-2Q3LI66 62 aa6.9□□□□□ -1.3
ERCC2-209ENST00000586856 PMAIP1Q13794 54 aa6.89□□□□□ -1.31
ERCC2-209ENST00000586856 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
ERCC2-209ENST00000586856 MT3P25713 68 aa6.66□□□□□ -1.34
ERCC2-209ENST00000586856 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
ERCC2-209ENST00000586856 KRTAP5-8O75690 187 aa6.61□□□□□ -1.35
ERCC2-209ENST00000586856 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
ERCC2-209ENST00000586856 PRO0628Q9UI54 55 aa6.49□□□□□ -1.37
ERCC2-209ENST00000586856 MUC5BQ9HC84 5762 aaPredicted RBP6.39□□□□□ -1.39
ERCC2-209ENST00000586856 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
ERCC2-209ENST00000586856 MUC5ACP98088 5654 aa6.36□□□□□ -1.39
ERCC2-209ENST00000586856 KRTAP5-1Q6L8H4 278 aa6.28□□□□□ -1.4
ERCC2-209ENST00000586856 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
ERCC2-209ENST00000586856 KTN1-AS1Q86SY8 53 aa6.2□□□□□ -1.42
ERCC2-209ENST00000586856 LCE1EQ5T753 118 aa6.07□□□□□ -1.44
ERCC2-209ENST00000586856 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
ERCC2-209ENST00000586856 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
ERCC2-209ENST00000586856 LCE1BQ5T7P3 118 aa5.72□□□□□ -1.49
ERCC2-209ENST00000586856 LCE1CQ5T751 118 aa5.63□□□□□ -1.51
ERCC2-209ENST00000586856 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
ERCC2-209ENST00000586856 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
ERCC2-209ENST00000586856 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
ERCC2-209ENST00000586856 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
ERCC2-209ENST00000586856 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
ERCC2-209ENST00000586856 KRTAP5-11Q6L8G4 156 aa5.11□□□□□ -1.59
ERCC2-209ENST00000586856 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
ERCC2-209ENST00000586856 KRTAP21-2Q3LI59 83 aa4.77□□□□□ -1.65
ERCC2-209ENST00000586856 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
ERCC2-209ENST00000586856 PHGR1C9JFL3 82 aa4.4□□□□□ -1.71
ERCC2-209ENST00000586856 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
ERCC2-209ENST00000586856 PRM1P04553 51 aa4.1□□□□□ -1.75
ERCC2-209ENST00000586856 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
ERCC2-209ENST00000586856 INE1O15225 51 aa3.66□□□□□ -1.82
ERCC2-209ENST00000586856 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
ERCC2-209ENST00000586856 KRTAP21-1Q3LI58 79 aa3.32□□□□□ -1.88
ERCC2-209ENST00000586856 H3BS24 57 aa3.18□□□□□ -1.9
ERCC2-209ENST00000586856 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 72.6 ms