RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 MT1HP80294 61 aa2.36□□□□□ -2.03
ZNF540-204ENST00000586792 KRTAP19-2Q3LHN2 52 aa2.34□□□□□ -2.03
ZNF540-204ENST00000586792 INE1O15225 51 aa2.33□□□□□ -2.04
ZNF540-204ENST00000586792 MRPL34Q9BQ48 92 aaKnown RBP2.33□□□□□ -2.04
ZNF540-204ENST00000586792 MMP24-AS1A0A0U1RRL7 71 aa2.31□□□□□ -2.04
ZNF540-204ENST00000586792 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
ZNF540-204ENST00000586792 WFDC13Q8IUB5 93 aa2.31□□□□□ -2.04
ZNF540-204ENST00000586792 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
ZNF540-204ENST00000586792 CRIPTQ9P021 101 aa2.24□□□□□ -2.05
ZNF540-204ENST00000586792 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
ZNF540-204ENST00000586792 H1FX-AS1Q4G0G2 97 aa2.23□□□□□ -2.05
ZNF540-204ENST00000586792 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
ZNF540-204ENST00000586792 MT2AP02795 61 aa2.2□□□□□ -2.06
ZNF540-204ENST00000586792 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
ZNF540-204ENST00000586792 MT1FP04733 61 aa2.18□□□□□ -2.06
ZNF540-204ENST00000586792 S4R3F8 94 aa2.18□□□□□ -2.06
ZNF540-204ENST00000586792 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
ZNF540-204ENST00000586792 H0YAA0 97 aa2.15□□□□□ -2.07
ZNF540-204ENST00000586792 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
ZNF540-204ENST00000586792 USH2AO75445 5202 aa2.11□□□□□ -2.07
ZNF540-204ENST00000586792 KRTAP19-6Q3LI70 58 aa2.06□□□□□ -2.08
ZNF540-204ENST00000586792 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
ZNF540-204ENST00000586792 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
ZNF540-204ENST00000586792 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
ZNF540-204ENST00000586792 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
ZNF540-204ENST00000586792 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
ZNF540-204ENST00000586792 MT1BP07438 61 aa2□□□□□ -2.09
ZNF540-204ENST00000586792 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
ZNF540-204ENST00000586792 M0QZ58 72 aa1.99□□□□□ -2.09
ZNF540-204ENST00000586792 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
ZNF540-204ENST00000586792 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
ZNF540-204ENST00000586792 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
ZNF540-204ENST00000586792 C10orf95Q9H7T3 257 aa1.91□□□□□ -2.1
ZNF540-204ENST00000586792 MT1XP80297 61 aa1.88□□□□□ -2.11
ZNF540-204ENST00000586792 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
ZNF540-204ENST00000586792 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
ZNF540-204ENST00000586792 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
ZNF540-204ENST00000586792 A0A0D9SG42 100 aa1.84□□□□□ -2.11
ZNF540-204ENST00000586792 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
ZNF540-204ENST00000586792 NEBP20929 6669 aa1.83□□□□□ -2.12
ZNF540-204ENST00000586792 KMT2DO14686 5537 aa1.82□□□□□ -2.12
ZNF540-204ENST00000586792 SPRR2EP22531 72 aa1.82□□□□□ -2.12
ZNF540-204ENST00000586792 SPRR2BP35325 72 aa1.82□□□□□ -2.12
ZNF540-204ENST00000586792 SPRR2AP35326 72 aa1.82□□□□□ -2.12
ZNF540-204ENST00000586792 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
ZNF540-204ENST00000586792 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
ZNF540-204ENST00000586792 SPRR2DP22532 72 aa1.77□□□□□ -2.13
ZNF540-204ENST00000586792 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
ZNF540-204ENST00000586792 MDN1Q9NU22 5596 aa1.75□□□□□ -2.13
ZNF540-204ENST00000586792 TNP1P09430 55 aa1.74□□□□□ -2.13
ZNF540-204ENST00000586792 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
ZNF540-204ENST00000586792 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
ZNF540-204ENST00000586792 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
ZNF540-204ENST00000586792 MT1EP04732 61 aa1.67□□□□□ -2.14
ZNF540-204ENST00000586792 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
ZNF540-204ENST00000586792 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
ZNF540-204ENST00000586792 MT1GP13640 62 aa1.64□□□□□ -2.15
ZNF540-204ENST00000586792 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
ZNF540-204ENST00000586792 MT1MQ8N339 61 aa1.6□□□□□ -2.15
ZNF540-204ENST00000586792 MT1LQ93083 61 aa1.6□□□□□ -2.15
ZNF540-204ENST00000586792 DSTQ03001 7570 aaKnown RBP1.57□□□□□ -2.16
ZNF540-204ENST00000586792 MT4P47944 62 aa1.54□□□□□ -2.16
ZNF540-204ENST00000586792 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
ZNF540-204ENST00000586792 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
ZNF540-204ENST00000586792 MT1AP04731 61 aa1.38□□□□□ -2.19
ZNF540-204ENST00000586792 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
ZNF540-204ENST00000586792 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
ZNF540-204ENST00000586792 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
ZNF540-204ENST00000586792 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
ZNF540-204ENST00000586792 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
ZNF540-204ENST00000586792 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
ZNF540-204ENST00000586792 PRM1P04553 51 aa1.13□□□□□ -2.23
ZNF540-204ENST00000586792 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
ZNF540-204ENST00000586792 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.23
ZNF540-204ENST00000586792 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
ZNF540-204ENST00000586792 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
ZNF540-204ENST00000586792 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 54.2 ms